Gene Pden_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1458 
Symbol 
ID4580241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1424485 
End bp1425009 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID639768773 
Productcupin 2 domain-containing protein 
Protein accessionYP_915254 
Protein GI119384198 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATC CCTCACCCGT ATCCCTTGCC CCCGTTATCC GGCTGGAAGA TCTTCATCTC 
GTTTCACAGG AACACGGCAG CCGGTTTTCA GCCCTGATGG CACCGATCGC TGCACCGCTC
GGAGCGACCC ATTTAGGAGC ACGGTTGGTG GAAGTTCCGC CCGGCAAGAC AGCTTGGCCC
TATCATAGCC ATCATGCAAA TGACGAAATG TTCGTGATCC TCTCCGGCTC GGGCGAGTTG
CGTTATGGTG CGGGCGAACG CCACAAATTG GCCGAAGGTA TGGTTGCGGT TTGCCCGGCA
GGCGGGGCTG AAAGCGCGCA TCAGATCATT GCCATCGGCT CCTCGCCACT GCGCTATCTT
GCCATCAGCA CGATGCGCGA ACCCGACGTG CTAGAGTATC CAGACAGCGG CAAGATCACA
GTCTTTGCCG GTGCCGCAGC TGGCGGGGAG AAAACTCTGC GCCGGGTAGC CGCGTCGTTC
CGGCAGGGAG ATGCGGTTGA TTACTGGGAA GGTGAGGACA CATGA
 
Protein sequence
MSHPSPVSLA PVIRLEDLHL VSQEHGSRFS ALMAPIAAPL GATHLGARLV EVPPGKTAWP 
YHSHHANDEM FVILSGSGEL RYGAGERHKL AEGMVAVCPA GGAESAHQII AIGSSPLRYL
AISTMREPDV LEYPDSGKIT VFAGAAAGGE KTLRRVAASF RQGDAVDYWE GEDT