Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1458 |
Symbol | |
ID | 4580241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1424485 |
End bp | 1425009 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639768773 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_915254 |
Protein GI | 119384198 |
COG category | [S] Function unknown |
COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATC CCTCACCCGT ATCCCTTGCC CCCGTTATCC GGCTGGAAGA TCTTCATCTC GTTTCACAGG AACACGGCAG CCGGTTTTCA GCCCTGATGG CACCGATCGC TGCACCGCTC GGAGCGACCC ATTTAGGAGC ACGGTTGGTG GAAGTTCCGC CCGGCAAGAC AGCTTGGCCC TATCATAGCC ATCATGCAAA TGACGAAATG TTCGTGATCC TCTCCGGCTC GGGCGAGTTG CGTTATGGTG CGGGCGAACG CCACAAATTG GCCGAAGGTA TGGTTGCGGT TTGCCCGGCA GGCGGGGCTG AAAGCGCGCA TCAGATCATT GCCATCGGCT CCTCGCCACT GCGCTATCTT GCCATCAGCA CGATGCGCGA ACCCGACGTG CTAGAGTATC CAGACAGCGG CAAGATCACA GTCTTTGCCG GTGCCGCAGC TGGCGGGGAG AAAACTCTGC GCCGGGTAGC CGCGTCGTTC CGGCAGGGAG ATGCGGTTGA TTACTGGGAA GGTGAGGACA CATGA
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Protein sequence | MSHPSPVSLA PVIRLEDLHL VSQEHGSRFS ALMAPIAAPL GATHLGARLV EVPPGKTAWP YHSHHANDEM FVILSGSGEL RYGAGERHKL AEGMVAVCPA GGAESAHQII AIGSSPLRYL AISTMREPDV LEYPDSGKIT VFAGAAAGGE KTLRRVAASF RQGDAVDYWE GEDT
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