Gene Pden_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1399 
Symbol 
ID4581322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1368345 
End bp1369001 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID639768715 
Producthypothetical protein 
Protein accessionYP_915196 
Protein GI119384140 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.313439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA GACGCAAGCC GCTGAGCTAT GCTCAGATGT GGACCGAGAT GTTCTATCCG 
CGCTCGGGCT GGAAGCGGGC GTCGAAATAC GTGCTGCATC GGCTGCGCCG CCTGCCGGAC
CAGCCGCATC GGGTGGCGCG CGGCTGGGCC TGCGGCATCT TCATCTCGTT CACGCCGTTT
TTCGGCTTTC ATTTCATGGG CGCGGCGGCG CTGGCCTGGC TGATCCGCGG CAATATCCTG
GCGGCGCTGC TGGGCACCTT CGTCGGCAAT CCGCTGACCA CGCCCTTCAT CGCGCTGACC
TCGGTGGGGC TGGGGCGCTG GATGCTGGGG GTCGAGGGCA AGTTCACCCC GCATCTGATC
TTTGACGAAT TCACCCGCGC CGGCAGCGAG CTGTGGAACA ACCTGCTGGC ACCGCTGAGC
GCGGAACGCA CGGCGCATTG GGACCAGTTG CTGCAATTCA ACGAGCAGAT ATTCCTGCCC
TATGCGGTGG GGGGCGTCCT GCCCGGCCTC GCGGTCTCGG TCGCGGCGCA TTACATGACC
GTGCCGCTGA TCAAGGCCTA TCACCGCCAC CGCGAAAAGC AGATGGCCGA GCGCATCGCC
CGCGCCAAGC TGCGGCGCGA GCGCGAACTG GCGGAAAGGG AACGGCCGGA AAGCTAG
 
Protein sequence
MFKRRKPLSY AQMWTEMFYP RSGWKRASKY VLHRLRRLPD QPHRVARGWA CGIFISFTPF 
FGFHFMGAAA LAWLIRGNIL AALLGTFVGN PLTTPFIALT SVGLGRWMLG VEGKFTPHLI
FDEFTRAGSE LWNNLLAPLS AERTAHWDQL LQFNEQIFLP YAVGGVLPGL AVSVAAHYMT
VPLIKAYHRH REKQMAERIA RAKLRREREL AERERPES