Gene Pden_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1396 
Symbol 
ID4581319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1364894 
End bp1365610 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID639768712 
Productglutamine amidotransferase class-I 
Protein accessionYP_915193 
Protein GI119384137 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.187754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GCATTCTCAA ATGCGGCCAA TCGCCCGAGG AGCTTCGCGG CGATCTGGGC 
GATTACGACA CCATGTTCGA ACGCCTTCTT GCCGGGCGCG GCTTCGAATT CTCCAGCTAT
CACGTCGAGG ACATGGAGTT CCCGCAGGGC GTCCATGACG CGCAGGGCTG GCTGCTGACC
GGCTCGCGTC ATGGCGTCTA CGAAGACCAC GCCTTCATCC CGCCGCTCCA GGACTTCATC
CGCGCCGCCT ATGCCGAGCA TGTTCCCTTG GTCGGCATCT GCTTCGGGCA CCAGATCATC
GCCCAGGCGC TGGGCGGCGC GGTGATCAAG CACCCGGACG GCTGGGCGGT GGGCGCGCAG
GACTACGATT TCGGCGGCGA GAGGGTCACG CTGAACGCCT GGCACCAGGA TCAGGTGATC
CGGCGGCCGG AAGGGGCCGA GGTGCTTGCC CGCAACGCCT TTTGCGAAAA CGCCGCGCTC
ATCTATGACG ACCGCGCTTT TTCCGTGCAG GCACATCCCG AGTTTTCCGA CAGCTTCATC
GAAGGGCTGA TCGAGCATCG TGCCCGCGGC ACGGTGCCCG AGCCGTTGCT GGACAGCGCC
CGCGCCCGCA TGGGCACGCC GCGGCAATCG ACCGGCATCG CCGACCGGAT CGAGGCGTTC
TTCAAGGATC CCGCCGCTTT CCGGGCACAG ACGCAAATCC GGCAGGGGGC CGCATGA
 
Protein sequence
MRIGILKCGQ SPEELRGDLG DYDTMFERLL AGRGFEFSSY HVEDMEFPQG VHDAQGWLLT 
GSRHGVYEDH AFIPPLQDFI RAAYAEHVPL VGICFGHQII AQALGGAVIK HPDGWAVGAQ
DYDFGGERVT LNAWHQDQVI RRPEGAEVLA RNAFCENAAL IYDDRAFSVQ AHPEFSDSFI
EGLIEHRARG TVPEPLLDSA RARMGTPRQS TGIADRIEAF FKDPAAFRAQ TQIRQGAA