| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1385 |
|---|
| Symbol | |
|---|
| ID | 4581308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1356043 |
|---|
| End bp | 1356627 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639768701 |
|---|
| Product | 5-formyltetrahydrofolate cyclo-ligase |
|---|
| Protein accession | YP_915182 |
|---|
| Protein GI | 119384126 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
|---|
| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.542535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCTG GTGTGAAGGG CGGGCTGCGC CAGGCGGCAC TGTCCGCACG CGCGCAGGGC
GGCGACGACG CCGCGCTGAC GCGCCATCTG ATTGCGGCGC TGGCGCCCCA TCGCGGCAAG
GTGCTGGCCG GCTATTGGCC GATGCGGGGC GAGGCCGATC CGCGCCCGGC CATGGCGGCG
CATGAGGGGC CGGTCTGCCT GCCGGTGGTG ACGGGTCCGG CGCGGCCGCT GGAGTTCCGG
GCCTATGACG GCCGGCTGGA GCCCGGCCGC TTCGGCACCA GCCATCCCCC GACCGATTCG
CCGGTGCTGG TCCCCGAGGT GCTGATCGTG CCGTTGGCCG GGTTCGACCG CGCGGGCCAC
CGGCTGGGCT ATGGCGGCGG CTTCTACGAC CGGACCCTAG CCGGCCTGCG TGCCCAGCGA
CCGGTCGCGG CGATCGGGCT GGCCTATGCC GTGCAGGAGA TTCGCGCCAT TCCGGCCGAG
GCGACCGACC AGCCGCTGGA CCTGATCATC ACCGACCGGG GTGTCATCAT GCCGCAGCCG
GAAAAAACCC AGGGCGCGAA TATGGGAACG AAATTGCAAC CCTGA
|
|---|
| Protein sequence | MGAGVKGGLR QAALSARAQG GDDAALTRHL IAALAPHRGK VLAGYWPMRG EADPRPAMAA
HEGPVCLPVV TGPARPLEFR AYDGRLEPGR FGTSHPPTDS PVLVPEVLIV PLAGFDRAGH
RLGYGGGFYD RTLAGLRAQR PVAAIGLAYA VQEIRAIPAE ATDQPLDLII TDRGVIMPQP
EKTQGANMGT KLQP
|
|---|
| |