| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1350 |
|---|
| Symbol | |
|---|
| ID | 4580603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1316144 |
|---|
| End bp | 1317529 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639768668 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915150 |
|---|
| Protein GI | 119384094 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3800] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02607] addiction module antidote protein, HigA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.248791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA GCTTCATGGG CGTCCGCCTG CGCCGTTTGC GCGAGGAACG CGGCATGACC
CAGGCGGCGC TGGCGCGCGC CCTGGGGATC TCGCCCAGCT ATCTCAACCA GATCGAGCAG
AACCAGCGCC CGCTGACCGT GCCGGTGCTG CTCAGGCTAA ACGGCGCCTT CGGCCTCGAC
GTGCAGCTGT TCTCGGATGC CGAGGAGGCG CGGCTGATCA CCGACCTGCG CGCGGCACTG
GCCGATCAGG GCGCGCCTGC GGCGACGGCG GAACTGCGGG AACTGGCCTC GAACATGCCC
GGCATCGCGC GGGCCATCGT CGCCATGCAG GCCCGGCTGC GCGAGACCGC CGAGCGCGCC
GACCTGCTGG CCGGCCGGCT GACCGAACCG CAGGCCGCCG CCACCCCCGC GGCCTTCGAG
GCGGTGCGCG ACTGGTTCTA TGACCGCCGC AACCATGTCC CGGAACTGGA GACCTCGGCC
GAGGCCATCG GCTCGGCGCT GCCGCCGGGG CGCATGGCGG CGGGGCTGGT CGACCGGCTG
GCCGGGCGTC ACGGCATCCG CATCGCACTG GACGCGGACA GCCTGCGCCG TTTCGATTCC
GGCGCACGCA TCCTGCATCT CGCCCCCCAT CTGAACGAGG GCCAGCAGGC CTTTCAGATC
GCCACGCAAT TGGCCTTTCT GGAACAGGGC GAGACCATCG CCCGGCTGTC GGACGATCCC
GACCTGGCCT CCGACGCGCA GGCGCTGTTG CGGATCGGGC TGGCGAATTA CTTTGCAGGC
GCGCTGATCC TGCCCTATGG CGCCTTCCTG CAAGAGGCCG AGGCGGTGGC CTATGACATC
GACCTGATCT CGCGCCGCTT CGGCGTGGGG TTCGAGACCG CCTGCCACCG CCTGTCCACC
CTGCAGCGCC CCGAGGCGCG CGGCGTGCCG TTCTTCTTCA TCCGCGTGGA CCGGGCCGGG
AACATCTCGA AGCGGCAATC GGCGACGGAT TTCCACTTCT CGCGCATCGG CGGCTCCTGC
CCGCTATGGA ACGTCTACGA GGCGTTTTCC CGGCCCGGAG AGATCGTCCG CCAGATCGCC
CAGATGCCGG ACGGGCGCAG CTATCTGTGG ATCGCGCGCG TGGTCAGCCA TGGCCGGGGC
GGGTTCGGGG CGCCGGTCAA GACCTTCGCG GTGGCGCTTG GCTGCGACCT CGCCCATGCC
GACCGGCTGG TCTATGCGCG GGGCCTGGAT CTGAAGAACC CCGAGCTTGC GACCAGGATC
GGCCCCGGCT GCAAGGTCTG CGAGCGTCCC GCCTGCCCGC AGCGCGCCTT TCCCATGGTC
GGCCGGCCGC TGGCCGTCAG CATCGCCGAG GCCCGCTTTG CCCCCTATTC GGCGGCCCCG
GGCTGA
|
|---|
| Protein sequence | MTKSFMGVRL RRLREERGMT QAALARALGI SPSYLNQIEQ NQRPLTVPVL LRLNGAFGLD
VQLFSDAEEA RLITDLRAAL ADQGAPAATA ELRELASNMP GIARAIVAMQ ARLRETAERA
DLLAGRLTEP QAAATPAAFE AVRDWFYDRR NHVPELETSA EAIGSALPPG RMAAGLVDRL
AGRHGIRIAL DADSLRRFDS GARILHLAPH LNEGQQAFQI ATQLAFLEQG ETIARLSDDP
DLASDAQALL RIGLANYFAG ALILPYGAFL QEAEAVAYDI DLISRRFGVG FETACHRLST
LQRPEARGVP FFFIRVDRAG NISKRQSATD FHFSRIGGSC PLWNVYEAFS RPGEIVRQIA
QMPDGRSYLW IARVVSHGRG GFGAPVKTFA VALGCDLAHA DRLVYARGLD LKNPELATRI
GPGCKVCERP ACPQRAFPMV GRPLAVSIAE ARFAPYSAAP G
|
|---|
| |