| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1292 |
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| Symbol | |
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| ID | 4580911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1253370 |
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| End bp | 1254941 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639768610 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_915093 |
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| Protein GI | 119384037 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG ATTTCGACCG CAGCATGTGG CGCCTGCTGG CCGACAACCT TCCCGCCCGC
GCGGACAAGA TCGCCGCCGT GGACCAGGGC CGCTCGGTCA CCTATGCCGA GCTTGCGGCC
GAGGCCGGGC GCGTGGCCGA CTGGCTCGCC CGACGCGGCA TCCGGCCCGG CGACCGGGTG
ATCGTGCATC TGCGCAAGGG CATCGACGAG GTTGCGGCCA TGTTCGGCGC CTGGAAGATG
GGCGCCGTGG TCGTCAACGT GAACATCCGC TGGACCCCCG CGCAGCTGGC CTATGTCGCC
GGCGACAGCC GGGCGCGCGC GGTGATCCTG CCCCGAAACG CGCTGGAGGC GCTTGTGGGC
GAACATGCCT TGCCCGAGGG CACGGCCTAT CTTGTTCAGG GCAAGGCCGA GGGCCTTGTC
CAGGGCGCGG ACCCCTGGGG GGCGCTTGCC GCCGACCAGG CTTCCGCGCC CGACGAATCC
GACCCGCGCG GGTTGGCGAT AATCATCTAC ACCTCGGGCT CGACCGGCGC GCCCAAGGGG
GTGATGCTCA GCCATCGCAA TATCCGCGTG GGCGCCATCT CGGTCGCGGA TTATCTGGGG
CTGGACGAAA GCGACCGCCT GCTGTCGGTG CTGCCCTACA GCTTCGATGC CGGGCTGAAC
CAGTTGACCA CCATGCTGCT GACGGGCGGG ACGGTGGTGC ATCAGCCGCT GACCATGCCA
GCCGAGATCA TCCGCATGGC CCAGGCCGAA TCGGTGACGG GGATCGCCGG CGTGCCGCCC
TTGTGGAACC AGATCGTGCG GCTGCTGGTG GACCGCCCGA CCGAGTTGCC GGCACTGCGG
CGCATCACCA ATACCGGCGG CAAGATCCCC CCGAACATCC TGGAACTGCT GCCGCAGGTG
TTTCCGGGCG TCGACATCTA CCTGATGTAT GGCCTGACCG AGGCCTTCCG CTCGACCTAT
CTGCCGCCTT CGAAATTCGC GGCCAAGATG GGCTCGATCG GCCGGCAGAT CCCGAACGCG
CAGGTCTTCG CCATCAAGCA TGGCGAGGGC GTCGCCGGTC CCGGCGAACA GGGCGAACTG
GTCCATGCCG GCCCGCTGGT CAGCATGGGC TATTGGGAAA AGCCCGAGGT GACGGCGCAG
AAGATCCGCC CCTGCCCGGA ACTGGCGCAT CTGCTGGGCG ACGAGCCCGT GGTCTGGTCG
GGCGATCTGG TCCGCGTCGA CCAGGACGGC GACCTGTGGT TCGTCAGCCG CATGGACGAG
ATGATCAAGA CGCTGGGCTT CCGCCTGTCG CCGACCGAGG TCGAGGATGC GATCTCGCAA
AGCGGGCTTG TCACCGACGT CGTGGCCTTC GGGGTCGAGG ATGCCGATCT GGGCCAGGCG
GTCCATGCGG TCGTGACCTA TCTGCCGCAA GCCGACGAGG CCGCGCTGGC CGCGCATTGC
GTCCGGGCGA TGCCGCATTA CATGCGTCCG CAGCACTATC ATTCCTGGCA AGGCGCGATG
CCGCGGACCG CCAGCGGCAA GCTGGACCGT CCCGCCATCA TTTCCGCGGC CAGGGCCGCA
TTGCAGAACT GA
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| Protein sequence | MSDDFDRSMW RLLADNLPAR ADKIAAVDQG RSVTYAELAA EAGRVADWLA RRGIRPGDRV
IVHLRKGIDE VAAMFGAWKM GAVVVNVNIR WTPAQLAYVA GDSRARAVIL PRNALEALVG
EHALPEGTAY LVQGKAEGLV QGADPWGALA ADQASAPDES DPRGLAIIIY TSGSTGAPKG
VMLSHRNIRV GAISVADYLG LDESDRLLSV LPYSFDAGLN QLTTMLLTGG TVVHQPLTMP
AEIIRMAQAE SVTGIAGVPP LWNQIVRLLV DRPTELPALR RITNTGGKIP PNILELLPQV
FPGVDIYLMY GLTEAFRSTY LPPSKFAAKM GSIGRQIPNA QVFAIKHGEG VAGPGEQGEL
VHAGPLVSMG YWEKPEVTAQ KIRPCPELAH LLGDEPVVWS GDLVRVDQDG DLWFVSRMDE
MIKTLGFRLS PTEVEDAISQ SGLVTDVVAF GVEDADLGQA VHAVVTYLPQ ADEAALAAHC
VRAMPHYMRP QHYHSWQGAM PRTASGKLDR PAIISAARAA LQN
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