Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1266 |
Symbol | clpX |
ID | 4580305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1226538 |
End bp | 1227803 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639768584 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_915067 |
Protein GI | 119384011 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATC CGACCGGCGG CGACAGCAAG AACACGCTCT ATTGCAGCTT CTGCGGCAAG AGCCAGCATG AGGTCCGCAA GCTGATTGCC GGTCCGACCG TATTCATCTG CGATGAATGC GTCGAGCTTT GCATGGACAT CATCCGCGAG GAGACCAAGT CCTCGGCGCT GAAATCCGGC GACGGCGTGC CCACCCCGCG CGAGATCTGC AACGTGCTGG ACGATTACGT GATCGGCCAG GAACATGCCA AGCGCGTGCT TTCGGTGGCG GTCCACAACC ATTACAAGCG GCTGAACCAC AGCTCCAAGA CCGATATCGA GCTGGCCAAG TCGAACATCC TGCTGATCGG TCCGACCGGC TGCGGCAAGA CGCTGCTCGC GCAGACCCTG GCGCGCATCC TGGACGTGCC CTTCACCATG GCCGACGCGA CCACGCTGAC CGAGGCCGGC TATGTCGGCG AGGATGTCGA GAACATCATC CTGAAGCTGT TGCAGGCCAG CGAATACAAC GTCGAGCGGG CGCAGCGCGG CATCGTCTAT ATCGACGAGG TCGACAAGAT CACCCGCAAG TCCGACAATC CCTCGATCAC CCGCGACGTC TCGGGCGAGG GGGTGCAGCA GGCGCTTCTG AAGATCATGG AGGGCACGGT CGCCTCGGTG CCGCCGCAGG GCGGGCGCAA GCATCCGCAG CAGGAGTTCC TGCAGGTCGA CACGACCAAC ATCCTGTTCA TCTGCGGCGG TGCCTTTGCC GGTCTGGACC GGATCATCGC GCAGCGCAAC AAGGGCACGG CCATGGGCTT CGGCGCCGCG GTCAAGGAAG ACGACGACAA GGGCGTGGGC GAGCTGTTCA AGCAGCTTGA GCCCGAGGAT CTGCTGAAAT TCGGCCTGAT CCCCGAATTC GTCGGCCGCC TGCCGGTGAT CGCCACGCTG GGCGATCTGG ACGAGCAGGC GCTGATCACC ATCCTGACCC AGCCCAAGAA TGCGCTGGTC AAGCAGTATC AGCGGCTCTT CGATCTGGAG AGCGTGAAGC TGACCTTCAC CGAGGATGCG CTGACCGCCA TCGCCAAGCG CGCCATCAAG CGCAAGACCG GCGCCCGCGG GCTGCGCTCG ATCATGGAGG ACATCCTGCT CGACACCATG TTCGACCTGC CCGGCATGGA CAGCGTCGAG GAGGTGGTGG TCAACGAGGA GGCGGTGGAC AATCCCACGG CCAAGCCGCT GCTGATCCAC ACCGATTCGA AGAAGGAAAC CGCCAGCGCC GGCTAA
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Protein sequence | MANPTGGDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ETKSSALKSG DGVPTPREIC NVLDDYVIGQ EHAKRVLSVA VHNHYKRLNH SSKTDIELAK SNILLIGPTG CGKTLLAQTL ARILDVPFTM ADATTLTEAG YVGEDVENII LKLLQASEYN VERAQRGIVY IDEVDKITRK SDNPSITRDV SGEGVQQALL KIMEGTVASV PPQGGRKHPQ QEFLQVDTTN ILFICGGAFA GLDRIIAQRN KGTAMGFGAA VKEDDDKGVG ELFKQLEPED LLKFGLIPEF VGRLPVIATL GDLDEQALIT ILTQPKNALV KQYQRLFDLE SVKLTFTEDA LTAIAKRAIK RKTGARGLRS IMEDILLDTM FDLPGMDSVE EVVVNEEAVD NPTAKPLLIH TDSKKETASA G
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