Gene Pden_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1212 
Symbol 
ID4578594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1183268 
End bp1184107 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content72% 
IMG OID639768529 
Producturease accessory protein UreD 
Protein accessionYP_915013 
Protein GI119383957 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCC GGCGCCTCTC TGGCCCCATG TTCGACGCCA TCGCACCCAT CAGAATGCAG 
CGTAGCCGGG GGGCCGCTTC GGTCCGGCTG GGTCCGCGCG GGATCGAGGA TCTGGCGCAA
TCGGGCTCGG CCAAGGCGAT GCTGCCGCGC ATGACCGCCG GGCGGCCCGA GATCGTCTTT
CTGAACACCG CCGGCGGGCT GGCCTCGGGC GACAGGCTGG ACTATCGCAT CGAACTGGCC
CCCCGCACGC AGGCGCTGGC CACCACCCAG ACGGCCGAAC GCGCCTATCG CGCCAAGGAT
GCGCCGGCAC AGATCCGGTT GCATCTGCAG GTGGGCGAAG GCGGCTGGCT GGATTGGCTG
CCGCAGGAGA CGATCCTTTA CGACGGCGCG CGGCTGGGGC GGGAAACGGC GGTCGATCTG
GCCCCCGGCG CGGGCTGCCT GCTGCTGGAG CCCATCATCC TGGGTCGTCT CGCCATGGGC
GAGACCATCC GGCACCTGCA GCTGACCGAC CGCCGCATCG TGCGGCAGGA TGGCCGGATG
ATCCATCACG ACGCGCTGGC GCTGGACGAT GCGGCGCTGT CCCGGCTGCA TCACCCCGCC
ATGCTGGGCA AAGCGCGGGC GATGGCCAGC CTGGCGCTGA TCGCCCCGCA TGCCGCCGAC
CTGCTGGAGC CGGCCCGCGC GGTGCTGGAC GAGCCCGGCG TCACCGGCGC GGCCAGCGCG
CCGCCGGGCC GCCTGATCCT GCGCCTGCTG GCGGACGACG GCTGGCCCCT GCGCCGGCAG
GTCATCCGTC TTTTGCGCGT CCTGCGCCCC GATCCCCTTC CCCGCATCTG GCAGGTCTAA
 
Protein sequence
MRGRRLSGPM FDAIAPIRMQ RSRGAASVRL GPRGIEDLAQ SGSAKAMLPR MTAGRPEIVF 
LNTAGGLASG DRLDYRIELA PRTQALATTQ TAERAYRAKD APAQIRLHLQ VGEGGWLDWL
PQETILYDGA RLGRETAVDL APGAGCLLLE PIILGRLAMG ETIRHLQLTD RRIVRQDGRM
IHHDALALDD AALSRLHHPA MLGKARAMAS LALIAPHAAD LLEPARAVLD EPGVTGAASA
PPGRLILRLL ADDGWPLRRQ VIRLLRVLRP DPLPRIWQV