| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1187 |
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| Symbol | |
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| ID | 4580070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1158682 |
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| End bp | 1159791 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768503 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_914988 |
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| Protein GI | 119383932 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CCGAAATACA CGTCTATGCC CATGACCTGC CGGTCAAGGA CGGGCCCTAT
ACCATCGCCA GCTCGACGGT CTGGTCCTTG CAGACCACGC TGGTCAAGAT CGTCGCCGAC
AGCGGCTTGG CGGGCTGGGG CGAGACCTGC CCGGTCGGCC CGACCTATGC GCCCAGCCAT
GCGCTTGGCG CCCGCGCCGC CCTGGCCGAG ATGGCGCCGG GCCTGATCGG CGCGAACCCG
TTGCAGCCGC TGGTCCTGCG CCGCCGGATG GACGGGCTGC TTTGCGGGCA CAATTACGCC
AAGGCGGCCA TCGACATCGC CGCCTATGAC CTGATGGGCA AGCATTACGG GGTGCGGGTG
GCGGACCTTT TGGGCGGCGT CGCGGCCGAG CGCGTGCCCT CCTATTACGC GACCGGCATC
GGCCAGCCGG ACGAGATCGC CCGCATCGCC GCCGAAAAGG TCGCCGAGGG TTTCCCGCGC
CTGCAGATCA AGATCGGCGG CCGGCCGGTG GAGATCGACA TCGAGACCGT CCGCAAGGTC
TGGGAACGCA TCCGCGGCAC CGGCACCCGG CTGGCGGTGG ACGGCAACCG CAGCCTGCCA
TCCCGCGACG CGCTGCGGCT CAGCCGCGAA TGCCCCGAGA TCCCCTTCGT GCTGGAACAG
CCCTGCAACA CGCTGGAGGA GATCGCGGCC ATTCGCGGCC GCGTCCAGCA CGGCATCTAT
CTGGACGAAA GCGGCGAGGA TCTGTCCACG GTGATCCGCG CCGCCGGCCA AGGGCTTTGC
GACGGGTTCG GCATGAAGCT GACGCGGATC GGCGGGCTGC AGCAGATGGC GGCGTTCCGC
GACATCTGCG AGGCCCGCGC CCTGCCCCAT AGCTGCGACG ACGCCTGGGG CGGCGACATC
ATCGCCGCCG CCTGCACCCA TATCGGCGCC ACCGTCCAGC CCCGGCTGAA CGAGGGAGTC
TGGGTCGCCC AGCCCTATAT CGCGCAACCC TACGACGAGG AGAACGGCAT CCGTATCGCG
GGCGGCCATA TCGACCTGCC CAAGGGCCCG GGCCTCGGCA TCACCCCCGA CGAAAGCCTG
TTCGGTCCGC CGGTTGCGTC GTTTTCCTGA
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| Protein sequence | MKIAEIHVYA HDLPVKDGPY TIASSTVWSL QTTLVKIVAD SGLAGWGETC PVGPTYAPSH
ALGARAALAE MAPGLIGANP LQPLVLRRRM DGLLCGHNYA KAAIDIAAYD LMGKHYGVRV
ADLLGGVAAE RVPSYYATGI GQPDEIARIA AEKVAEGFPR LQIKIGGRPV EIDIETVRKV
WERIRGTGTR LAVDGNRSLP SRDALRLSRE CPEIPFVLEQ PCNTLEEIAA IRGRVQHGIY
LDESGEDLST VIRAAGQGLC DGFGMKLTRI GGLQQMAAFR DICEARALPH SCDDAWGGDI
IAAACTHIGA TVQPRLNEGV WVAQPYIAQP YDEENGIRIA GGHIDLPKGP GLGITPDESL
FGPPVASFS
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