Gene Pden_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1170 
Symbol 
ID4579935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1141115 
End bp1141867 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID639768486 
ProductABC transporter related 
Protein accessionYP_914971 
Protein GI119383915 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.842608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC CGCTGATCCG CGCCGAAGGG GCCGCGCATT CCTGGGATGG AACCCGCTGG 
CAGTTCCGCG ACCTGGATTT CGCGGTCGCG GCGGGCCAGG TCACGGCCGT GCTTGGCGCC
AACGGCTGCG GCAAGTCCAC GCTGCTGCGG GTCGCCACCG GGCTGCGCGC ACCGACCCGG
GGGCGGATCA CGGTGGCCGG CACCGCGGCG CTGGTGCCGC AGGACTTTGC CCGCGCCTTT
CCCTATCGCG TGATCGACAT GGTGCTGATG GGTCGCGCGC GCCACATCGG ATTGCTGCGC
ATGCCGGGGC GCCGCGACCG CGAGGCGGCG ATGGAGGCGC TGGCGGTGAT CGGCCTTGCC
GGCAAGGCGG CCGAGCGTTT CGACGCCTTG TCGGGCGGGC AGCGCCAGAT GGTGCTGATC
GCGCGCGCCA TCGCGGCCGA ACCCGCGGCG CTGTTTCTGG ACGAGCCCGC CTCGGCGCTG
GACCTTGGCA ATCAGGACCG GGTGCTGCGG CTCGTGCGCG TTCTGGCCGA TCGCGGGCTG
GCCGTCGTCA TGACCACGCA TCAGCCCAAC CACGCGCTGG CCGTCGCCGA CACGGCGCTG
CTGATGTTGC CGGAGGGGGC GGTCTTTGGG CCCTGCCACG AGGCTTTGAC CGAGACCCGG
ATCGAGATGC TTTACGGTTT GCCGGTGAGG ATCCTCGACG TAAAGGCGGC CGACCGCGGG
TTCCGCTCCG TGGTGCCGCT CTATCGCGGA TAG
 
Protein sequence
MAEPLIRAEG AAHSWDGTRW QFRDLDFAVA AGQVTAVLGA NGCGKSTLLR VATGLRAPTR 
GRITVAGTAA LVPQDFARAF PYRVIDMVLM GRARHIGLLR MPGRRDREAA MEALAVIGLA
GKAAERFDAL SGGQRQMVLI ARAIAAEPAA LFLDEPASAL DLGNQDRVLR LVRVLADRGL
AVVMTTHQPN HALAVADTAL LMLPEGAVFG PCHEALTETR IEMLYGLPVR ILDVKAADRG
FRSVVPLYRG