Gene Pden_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1160 
Symbol 
ID4580473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1132706 
End bp1133068 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content70% 
IMG OID639768478 
ProductHPP family protein+B94 
Protein accessionYP_914963 
Protein GI119383907 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.925167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGA TCGCGCCCTT CTGGGCAAGC TGCGTGCTGC TGTTCGCCCT GCCGCAAAGC 
CCGCTGGCAC GGCCGCGCAA CGTCATCGGA GGGCATCTCC TGTCGGCGCT GGTCGGGCTT
TTGGTGCTGA ACCTGATCGG CGATTCCGTG CTGGCCATGG GGGTCGGGGT CGGCCTGGCC
ATCGCCGTCA TGCAACTGAC CGGAACCCTG CATCCGCCCG CGGGCGGCGA CCCGCTGGTG
GTGATCCTGA GCGGCGCGGG CTGGTCCTTT CCGGGCGTGC CGATCCTGGC GGGAACGGTG
ACGCTGGTGG CGGCCGCCAT CGCCTATCAC CGGCTGATCT CGATGCGGGC CTATCCGGGC
TGA
 
Protein sequence
MLLIAPFWAS CVLLFALPQS PLARPRNVIG GHLLSALVGL LVLNLIGDSV LAMGVGVGLA 
IAVMQLTGTL HPPAGGDPLV VILSGAGWSF PGVPILAGTV TLVAAAIAYH RLISMRAYPG