| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1148 |
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| Symbol | |
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| ID | 4580462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1124465 |
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| End bp | 1125124 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639768467 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_914952 |
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| Protein GI | 119383896 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.403582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACTTCG ACCTTGCGGC GTTTGGTGAC GCCTTTCCCC GGCTGCTGCC CGCAGCCCTC
ACCAACCTGA CCATCGCGCT GGTGGCGATG ACGCTGGCGC TGATCGGCGG CACCGTGCTG
ACGGTGCTGC GCACCACCGG CATCGGCCTG CTGACAGGCG CCATCGGCGT GCTCATCAGC
TTTATCCGCG GCACGCCGAT CCTGGTGCAG ATCTTTCTGT TCTACTATGG GTTGCCGGCG
CTGGGGCTGG ACCTGACGCC GATCCAGGCC GGGGTGCTGG CCATCGCGCT GAACAGCTCG
ATCTTCATCA CCGAGATCAT GCGCGGGGGG CTCTCCGGCA TGGATCCCGG CCCGGTCGAG
GCCGCCATCG CCCTGGGTGT GCGGGCGCGG ACGATCTGGA CGCGGGTGAT TCTGCCGCAG
CTTTACATCC GCATCCTGCC GCCGCTGGTC AACGAGTTGA CCACCATCGT CAAGGGCACC
GCGCTGCTGT CGGTCATCAC CGTGGTCGAG GTGCTGCGCA CCGCGCAGCA GATCGCCAAC
ACCACCTTCC GCCCGCTTGA GGCGCTGCTG GCCGCCGCCA TCGTGCTGTT CGCGCTGAAC
CTGGCGATCA GCCAGCTGGG CCGGCGCATC GAAACCCGCT TCGCCGCGCG CAGGGGATAG
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| Protein sequence | MDFDLAAFGD AFPRLLPAAL TNLTIALVAM TLALIGGTVL TVLRTTGIGL LTGAIGVLIS
FIRGTPILVQ IFLFYYGLPA LGLDLTPIQA GVLAIALNSS IFITEIMRGG LSGMDPGPVE
AAIALGVRAR TIWTRVILPQ LYIRILPPLV NELTTIVKGT ALLSVITVVE VLRTAQQIAN
TTFRPLEALL AAAIVLFALN LAISQLGRRI ETRFAARRG
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