| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1147 |
|---|
| Symbol | |
|---|
| ID | 4580461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1123561 |
|---|
| End bp | 1124403 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639768466 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_914951 |
|---|
| Protein GI | 119383895 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.421653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCC GCCGCACCTT CGCCGGCCTG TCGGTCAGCA TCGCCATCGC CCTGGCGAGC
GCAGTGCCGG CTCTGGCCGA AACCACCTTC GAGAAGATCA AGCGCACCGG CACGATGGTC
GTGGGCACCG AGGCTGCCTA TCCACCGTTC GAATTCGTCA AGGACGGGCA GATCACCGGC
TTCGGCCGCG ACCTGCTGGA CGAGATCGCC AGGTCCTGGG GCGTCGAGAT CAAGCAACTC
GACCTGCCGT TCCAGGGCAT CCTGCCGGGG CTTCTGGCGC AGAAATTCGA CTTCGTGGCG
ACCTCGGTCG GCATCAACCC GGAGCGGGCG GCGCGCTATG CCTATACGCT GCCCATCGCC
GACAGCACCG CCTATGCCAT CAAGCGCGCC GGCAACGACC ACATCAAGGG CGTCGAGGAC
CTGGCCGGCA AGGTGGTGGC GACGCAGCTC GCCTCGGCCG TCGATCCGGT CGCCAAGGCG
CTGGACGAGA AGCTGAAGGC CGAGGGCAAG GGCTTTTCCG AGCTCAAGCT GTTCCCGACC
TTCAACGATT CCTTCCTGGC GGTGGCCAAC GGCACGGCGG ATGCCGCCAT GGCGGGGCTG
CCGGTGCTGC AAAACCTGAT GAACGAACGC CCGGGCGTCT TCGAGCTGGT CGGGCAGGCG
GCGGATACCC AGAGCCTGAA CGCCTGGGTG GTGCGCCCCG AGGACAAGGA CCTGCGCGAC
GCCATCAACG CCGTCGTCCT GGAGCTGAAG GCCAGCGGCC GCTTTGCCGA ATTGCAGCAG
AAATGGCTCG GCATGACCTA CGACCTGCCC GAAAAGGACT ACCTGCCCGA AGGGGCGCTC
TGA
|
|---|
| Protein sequence | MITRRTFAGL SVSIAIALAS AVPALAETTF EKIKRTGTMV VGTEAAYPPF EFVKDGQITG
FGRDLLDEIA RSWGVEIKQL DLPFQGILPG LLAQKFDFVA TSVGINPERA ARYAYTLPIA
DSTAYAIKRA GNDHIKGVED LAGKVVATQL ASAVDPVAKA LDEKLKAEGK GFSELKLFPT
FNDSFLAVAN GTADAAMAGL PVLQNLMNER PGVFELVGQA ADTQSLNAWV VRPEDKDLRD
AINAVVLELK ASGRFAELQQ KWLGMTYDLP EKDYLPEGAL
|
|---|
| |