| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1096 |
|---|
| Symbol | |
|---|
| ID | 4578792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1071142 |
|---|
| End bp | 1072143 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639768415 |
|---|
| Product | glycoside hydrolase family 3 protein |
|---|
| Protein accession | YP_914900 |
|---|
| Protein GI | 119383844 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.340288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA AGGCCGATGC CTATGCCGTG CTGCTGCCGG CGATCGACGA TCTGGTGCTG
ACCGATCCGC TGGCGCGTTT CCTGGATCAG GGCGGCCGCG CCCTTCTGAT GGGCGAAACG
CGGGCGGAAT ATGTCGCGCG CAGCATGTCG GACGCCCGCC GCCGGGGCGA AAGCGCCGAC
AAGTTGCGCG CACTGACCGG CCGGATCACC GGCCTTGCCG GCCCGGCGCT GGTGGCGCTG
GATCAGGAGC CCTCGGGCAT CCGCCGGCTG CACGGGCTGG TGCCGCAACT GCCCGACAAC
GAGGCGCTGC ACGCCATGGC CTCGGAAGAG ATCGAGCGGG TCGCGTTCCG CATGGCCCAG
GCGGCGCGCG GAATGGGCGT GACCATGTTT CTGTCGCCGG TCATCGACGT GGTGACCGGG
CACAATCCCT GGCTGCAGGG CCGGACATTG GGCACCGATG CGGTCGAGGT GGCGCGGATC
GGCTGCGCCT TTATCCGCGG CGTCGAGGCG GCGGGCGTCG TCGCCACCGC CAAGCATTTC
CCCGGCCATC ACGACATCGA CGGGGATCCG GCGGTGGATG CGGCCACGGT CAGCGGCGGG
GCCGACGCGC TGGCGCCCGG CATGGTCCCC TTTCGCGCGG CCATCGCCGC GGGTGCGCGC
GCGGTGATGA CCGGACCGGC GCTGGTGCCG GGGATGGACG CCACGATGCC CTCGTCGCTT
TCTGCCACCA CCATCGCCGC GCTGCGGGGG CTGGGTTTCA CCGGGCTGGT GGTCAGCGAC
GACCTCGACG CCGCCGGCAC CCTGCGCGGC CAGCGCGACG TCCCGACGGC GGCGGTCGAG
GCCTTGCGCG CAGGGTCCGA CCTGCTGCTT TTGTCGGCGG CGAACGATCT GGAACAGGTC
CGCACCCGCA TCCTGTCGGC CGTCGCCGAA GGCAGCCTGC CCGATGAGCG CCTGACGGAA
GCCGCCGCCC GCGTCCGCGC GCTTGCCGAC AGCATGGGTT AA
|
|---|
| Protein sequence | MSLKADAYAV LLPAIDDLVL TDPLARFLDQ GGRALLMGET RAEYVARSMS DARRRGESAD
KLRALTGRIT GLAGPALVAL DQEPSGIRRL HGLVPQLPDN EALHAMASEE IERVAFRMAQ
AARGMGVTMF LSPVIDVVTG HNPWLQGRTL GTDAVEVARI GCAFIRGVEA AGVVATAKHF
PGHHDIDGDP AVDAATVSGG ADALAPGMVP FRAAIAAGAR AVMTGPALVP GMDATMPSSL
SATTIAALRG LGFTGLVVSD DLDAAGTLRG QRDVPTAAVE ALRAGSDLLL LSAANDLEQV
RTRILSAVAE GSLPDERLTE AAARVRALAD SMG
|
|---|
| |