| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1093 |
|---|
| Symbol | |
|---|
| ID | 4578789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1068069 |
|---|
| End bp | 1068911 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639768412 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_914897 |
|---|
| Protein GI | 119383841 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGT CAGACCTTAC CCACGACCCC GCCGGCCGCA TGGCGAATTT CGCCGCAAAC
CTGCGCCTGC TTTGCGACCG GCAGGGCTCG ATCTCGCAGA TCTGCCGCAA GCTCGGCATC
AATCGGCAGC AGTTCAACAA ATACCTGTCG GGCCGCCACA TGCCCTCGTC GGGCAACACA
CGCCTGATCG CGAATTTCTT CGGCCTCGGC CCCGACATCC TGTTCAGCGA ACATGAGCGT
TTCCGCGCTC TGGTCGACGG CAACTTCTTC GACGTGCTGG ACCATCTGCG CCGGGCGCCG
CAGGTCGCGC GCTTTCTCGA TACGGTGGCG GTCTCGACCA AGATCGACAT GGGGGAATAT
GTCGGCTGCT ATGACCGCTA CCAGTATTCC TCGATCTACG CGCGCAAGAT CCTGCGCTCG
GCCTTCTGCA TCTTCCAAAG CGGAGATTTC CTGAACCACT ATTACGTCGA GCGTTTTCCC
AGCTACGACG ACCCGTCGCG CACCGAATAC ATCTTCAAGT ATCACGGCTT CACCTTCCCG
GTAGAGGACC GCGTCTTCAC CATCGACTTC GAGACGGTGC AGCGCAACGA ATTCACCTTT
GGCATCTTCT CGACCGTGCA GCGCAGCGCC AAGCGCTTCA TGTTCGGCAT CGTCAGCGGT
GTCGCGGCGA CGATGTTTCG CCAGCCCTTC TCGACCCGCG CGGTGCTGCA TTACCGCCGC
CCCGGTTTGC TGAGCCGGGC GGAACTGCAG GCGACCACGA CGCTGGACAT GAACGACGCC
TCGATCCCCC GCGAGGCGCG CGAATATCTG GGCGAAAGCC CCGACATGAT CAAGCCGGTC
TGA
|
|---|
| Protein sequence | MTRSDLTHDP AGRMANFAAN LRLLCDRQGS ISQICRKLGI NRQQFNKYLS GRHMPSSGNT
RLIANFFGLG PDILFSEHER FRALVDGNFF DVLDHLRRAP QVARFLDTVA VSTKIDMGEY
VGCYDRYQYS SIYARKILRS AFCIFQSGDF LNHYYVERFP SYDDPSRTEY IFKYHGFTFP
VEDRVFTIDF ETVQRNEFTF GIFSTVQRSA KRFMFGIVSG VAATMFRQPF STRAVLHYRR
PGLLSRAELQ ATTTLDMNDA SIPREAREYL GESPDMIKPV
|
|---|
| |