Gene Pden_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1045 
Symbol 
ID4578626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1023021 
End bp1024043 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID639768367 
Productproline racemase 
Protein accessionYP_914852 
Protein GI119383796 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3938] Proline racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCA GGCGAATGGT CAATGTCGTC AGCGCCCACG CCGCCGGAGA ACCCAACGAC 
GTTATCACCG GCGGCGTGCT GAACGTGCCC GGCCGGACCA TGTTCGAGAA GATGACATGG
TTGCAGGACA AGGGCGACGA CCTGCGCCTG TTTCTGCTCA ACGACCCGCG CGGCAAGGTC
AGCCTGTGCA TGAACCTGAT CCTGCCCTCG AACGATCCCA AGGCGGATTT CGGCTTCGTC
ATCATGGAAT CGGACTACTA TGTGCCGATG TCGGGCACGA ACACGATCTG CACCGCGACC
GTGGCGCTGG AAACGGGCAT GGTGCCGATG ACCGAGCCCG AGACCCGCAT CGTGCTGGAG
GCACCCGCTG GTCTGGTCCC CGTCACCGCG AAATGCCGCG ACGGCAAGGT CGAAAGCGTC
ACCTTCGACA ATGTGCCCTC GTTCGTCTTT GGCCTCGATC AGGCTATCGA GGTGCCGAAC
CTCGGCAGGC TGACGGTGGA TGTCGCCTAT GGGGGGATGA TCTATGTGCT GGTCGATGCC
GCGGCGGTCG GCTTCGAGAT CAAGCCCGAG GAGGCCCGGC ACATGGTCGA GATCGGCGAG
CGCATCAAGG CAGCCGCCGC CGAACAGCTT CCCGCCATCC ATCCGGAAAA CCCCGGCATC
CACACCATCA ACCAGACGCT CTTCGCCGGC CCGCTGTTGG AAACCGAACG CGGCAAGGTC
TCGAAGAACG GTGTGATCGT CTCGCCCGGG CGGCTTGACC GCTCGCCCTG CGGCACCGGA
ACCAGCGCCC GGCTGGCGGT CCTGCATGCC CGCGGCCAGA TCGCCGAAGG CGAGACTTTC
ATCCATCAAA GCATCATCGG CACGGAGTTC ACCGGCACCG TCACCGCCAC CACCAAGGTC
GGCGTGTTGC CCGCGATCCG CCCCGCCATC ACGGGCACGG CCTGGATCAC CGGATTTCAC
CAGCACGTGC TGGATCCCAG CGATCCATTC CCCACCGGCT ACCGCCTGAA CGACACCTGG
TAA
 
Protein sequence
MRFRRMVNVV SAHAAGEPND VITGGVLNVP GRTMFEKMTW LQDKGDDLRL FLLNDPRGKV 
SLCMNLILPS NDPKADFGFV IMESDYYVPM SGTNTICTAT VALETGMVPM TEPETRIVLE
APAGLVPVTA KCRDGKVESV TFDNVPSFVF GLDQAIEVPN LGRLTVDVAY GGMIYVLVDA
AAVGFEIKPE EARHMVEIGE RIKAAAAEQL PAIHPENPGI HTINQTLFAG PLLETERGKV
SKNGVIVSPG RLDRSPCGTG TSARLAVLHA RGQIAEGETF IHQSIIGTEF TGTVTATTKV
GVLPAIRPAI TGTAWITGFH QHVLDPSDPF PTGYRLNDTW