| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0957 |
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| Symbol | |
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| ID | 4579668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 943441 |
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| End bp | 944784 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639768278 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_914764 |
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| Protein GI | 119383708 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.389823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.579719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGT ACAAGGGTTT GAGAGGGATC ATCTCCTATG ACGCGATGGA GACGATCCGC
AACACCAACG AATGGATGGG GGCCAGCGCC CGTGCGCTTT CCTCCTATCC GGCCTTTGCG
CTGATGCCCA ATCCGCTGTT CAAGCTGATG TCGGCCTGGG GCCGGGTGAC CGAGCGCAGC
TTTGCGCGCA TGGTCATCAA GCCGGACTGG GAAATCCCGC CCGTCGTTTC CGAGGACGGC
CAGGACCATG TCGTCTATAT CGAGCCGGTG ATCGAGCGGC CCTTCGGCGA CCTGGTGCAT
TTCCGCGTCG CCCGCCGCGC GCCCCAGGCG CGCAAGGTTC TGCTGGTCGC ACCGATGTCG
GGCCATTACG CCACTCTCCT CCGCACCACG GTCACATCAT TGCTGCCCGA TTGCGAAGTC
TATGTGACGG ATTGGCACAA TGCCCGTGAC ATTCCGGTCA GCTGCGGCAA GTTCGACGTC
GACGACTACA CCCAGTATCT GGTCGACTTC ATCCGCCATC TCGGCCCCGA CACCAATGTG
ATCGCCGTCT GCCAGCCCGC GCCGCTGGCC CTGGCCGCGA CCGCATTGCT GGCCGAGGAG
GATCCCAAGG CCCAGCCGCG CTCGCTGATC CTGATCGGCG GCCCGATCGA CCCCGACGCG
GCGGCGACCG AAGTGACCGA TTTCGGCAAC CGCATCACCA TGGGCGAGCT CGACTACCTG
ATGATCCAGC AGGTCGGCTT CAAGTATCGC GGCGCCGGGC GCATGGTCTA TCCGGGCCTC
GCCCAGCTTT CCTCCTTCAT CGCCATGAAT GCCGAGACCC ATGCCAAGGC GTTCCTCGAC
AAGATCTTCG CCGAGGCCCG CGGCCAGGGC TCCGAAGGCG ACAAGCACAA CACCTTCTAC
GACGAATATC TCGCCGTGAT GGACATGACC GCCGAATTCT ACCTTTCGAC GGTCGAGCGC
ATCTTCAAGG AACGCGAGAT CGCGCGGAAC TGCTTTACCG TGAACGGCAA GCCGGTAGAC
CTGGGCAAGA TCACCGATGT CGCGGTCATG ACGGTCGAGG GCGCCAATGA CGACATCTCG
GCGCCCGGCC AATGCGTCGC GGCGCTGGCG CTCTGCACCG GCGTGCCCGA AAGCCGCAAG
ACCCAGCACC TCGAGCCCGG CGCCGGCCAT TACGGCATCT TCGCCGGCAA GAGCTGGCGG
CTGAACATCC GCCCGCTGGT GCTGGATTTC ATCGACGAGC AGTTGCAGCC GACGGGCCAG
CGCAAGCGGC GCCGCAGCGG CCCCGTCCCG GTCGATTGCG GCGTGACCAA CTTTTCGGAA
CAGGACGCCA AGATCGCCGT CTGA
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| Protein sequence | MTTYKGLRGI ISYDAMETIR NTNEWMGASA RALSSYPAFA LMPNPLFKLM SAWGRVTERS
FARMVIKPDW EIPPVVSEDG QDHVVYIEPV IERPFGDLVH FRVARRAPQA RKVLLVAPMS
GHYATLLRTT VTSLLPDCEV YVTDWHNARD IPVSCGKFDV DDYTQYLVDF IRHLGPDTNV
IAVCQPAPLA LAATALLAEE DPKAQPRSLI LIGGPIDPDA AATEVTDFGN RITMGELDYL
MIQQVGFKYR GAGRMVYPGL AQLSSFIAMN AETHAKAFLD KIFAEARGQG SEGDKHNTFY
DEYLAVMDMT AEFYLSTVER IFKEREIARN CFTVNGKPVD LGKITDVAVM TVEGANDDIS
APGQCVAALA LCTGVPESRK TQHLEPGAGH YGIFAGKSWR LNIRPLVLDF IDEQLQPTGQ
RKRRRSGPVP VDCGVTNFSE QDAKIAV
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