| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0838 |
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| Symbol | |
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| ID | 4579453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 821848 |
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| End bp | 826473 |
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| Gene Length | 4626 bp |
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| Protein Length | 1541 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639768157 |
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| Product | amino acid adenylation domain-containing protein |
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| Protein accession | YP_914646 |
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| Protein GI | 119383590 |
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| COG category | [C] Energy production and conversion
[J] Translation, ribosomal structure and biogenesis
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase
[COG1020] Non-ribosomal peptide synthetase modules and related proteins
[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT TTTCCGCGAT TCTGGTGGGT AACGAATCCC TGCTGCGCCA TGCGGCCGAG
ACGCTGCTGG CGCGCGGGCA TCGCATCGCC GCCGTGGTGA CGCGCAATCC CGACCTGCGC
GACTGGGCGC AGGGCGCGGG GCTGGCGGTC GAGGATCAGG ACGCGCCCAT GGCCCCGGAT
GCTCTGTCTG CCGACTGGCT CTTCAGCGTC GCCAACCTGT CGATCCTGCG CCCCGAGATG
CTGGCGCGCG GCCGGCTTGG CGCGATCAAT TTCCATGACG GGCCTTTGCC GAAACTGGCG
GGGCTGAACG CCCCGGTCTG GGCGATCATC GGCGACGAGC CGCAGCACGG CATCACCTGG
CACATGATCG AGGGCGGGGT GGACGAGGGT GACATCCTGA CCCAGCGCCT GTTCGAGATC
CGCCCCGACG ATACCGCGCT GACCCTGAAC GCGCGCTGCT TTGCCCGCGG CGCCGAAAGC
TTTGCCGATG TGGTGGCGCA GCTTGAGGGC GCCGGGCCGC AGCGGGTCAG GCAGGACCTG
TCGCTTCGCA GTTATGTCGG CCGCGACAAG CGCCCCGAAG CCGCGGCGGT GCTGGATTTT
ACGCAGCCCG CCGCGCGGAT CGGCGCGCTG GTGCGCGGTC TCGACCATGG CGGCTACTGG
AACCCGCTGG CCATGCCCAA GGTGAAGCTG GCCGATAGCG TGCTGCTGGT CACGGGCTTC
GAGGGGGTCG AGCCCGCCAG CGCCCCGCCC GGCACGGTGC TGTCCCATGA CGGTGCCTCG
GCGCTGATCG CGGCGGCGGA TGGGGCGGTC AGGCTGCAAT TCGCCGGCGC GCTGCCGCCG
GTCGGCGTGG TGGTTCCGGC GCTTTCCACC GAGGAACATG CGCATCTGAC CGCCTTGGGC
GAGCAGGCGG CGAAGCATGA CGGTTTCTGG CGCGCGCGGC TGGCGCGGAT GAACCCGGCG
GTGCTGCCGG GCGAGGATTC GGGTTCGATC CGGCGCGTGC AACTGATGCC CGGCGCCGCG
CCCGAGCGGA TCGCGCTGGC GGCCGCGCTG CTGGCGCGGC TGGCGGGGCA GGCCGGGTTC
GATCTGGCGC TGCGACCCCA GGGCCGGCCC GAGGCGGCGG GGATCGTCGC CGATTGGCAG
CCGCTGGCTG TCGAGGCGGC GGGCGACCGG ACCCTGGCCG ATCTGGGGCA GGCGCTGGCC
GGGCAGATCG CCGATCAGGC GAAGCGCGGC TTTTTCATGG CCGACCTGCT GCATCGCGCG
CCCGAACTGC GCGACATGGC GGTGCCGGAT CTGGCGATCA GTCTTGATGC CCGCGGCCCG
GTCAAGGGCG CGGCGCTGAC CGTGACCCTG TCCGAAAACG GTGCCTGGCT GGACCATGAT
CCGGCTCGGG TCACGTCCGC GCAGACGCAG CGGCTGGCCC GCGCGCTGGA CGGGGGCCTG
GCGCTGCCCG GCGCCACGGC GCTGCGCGAC ATCCCCCTGA TGGACGCGGG CGAGCGCGAG
GAGTTGCTGG TCGCCCGCAA CGCCACGCAG GTGGACGTGC GGCTGGCCTG CATCCACGAA
TTGATCGCCG AGATGGCCGG GGCCGACCCG GATGCCGTGG CGCTGGCCTT CGAGGATCGC
ACGCTGACCC GCGGCCAGCT TGACCGCGCG GCGAATGCGC TGGCGGCGAA GCTGGTGCAG
ATGGGCGTCG GCCCGGACCA GCCGGTCGGG CTGTTTGCCC GTCGTTCGCC TGAACTGGTG
ATCGGGGCGC TGGCGATCTG GAAGGCCGGC GGTGCCTATG TGCCGCTGGA CCCGGACTAC
CCCGCCGACC GCATCGAGCT TTATATCGAG GACAGCGGCG CCGGGGTGGT GCTGGTGCAG
GACGGCCTTG CCGACCGGCT GCCTGCGCAT GGCGCGCAGG TGGTGACCAT CCCGACCGAC
CTGCCGCATG GCATGGTGGC GGCGCCGGTC AGTGCGGTCG GGCCGCAGAA TCTGGCCTAT
CTGATCTATA CCTCGGGCTC GACCGGGCGG CCCAAGGGGG TGATGGTCGA GCATCGCAAC
GTGGCGAACT TCTTTGCCGG CATGGATGCG GTGATCCCGC ATCAGCAGGG CGATGCCTGG
CTGGCGGTGA CGAGCCTTTC GTTCGATATT TCAGTGCTCG AGATCTTCTG GTCGCTGGCG
CGCGGATTGC GGTTGGTGAT CGCGGGCGAG GAATCGCGGC TGGCGGTGTC CTCGGCGCCG
GCCCAGCCGC GCCGCGAGGT TTCGGGCGGC ATGGATTTCA GCCTGTTCTA CTGGGGCAAC
GACGACGGTC CCGGCCCGAA GAAATACCAG CTTCTGCTGG AGGGCGCGCG TTTCGCCGAC
CAGAACGGCT TTGTCGCGGT CTATACGCCG GAACGGCATT TCCACGCTTT CGGCGGACCC
TATCCGAACC CGGCGGTTTC GGGCGCGGCG GTTGCGGCGG TCACGAAAAA CGTCGCCGTC
CGCGCCGGCA GTTGCGTGCT GCCATTGCAT CACCCGGCCC GCGTGGCCGA GGAATGGGCG
GTGATCGACA ACCTGACCTC GGGGCGGGCG GGGCTGGCCA TCGCCTCGGG CTGGCAGCCG
GACGATTTCG TGCTGCGCCC CGAGAACGCG CCGCCGAACA ACAAGGCGGC GCTGGCCGAG
GGCGTGGACC AGTTGCGCCG GCTGTGGCGC GGCGAGGCGG TGGAGTTCCC GCGCAAGGAC
GGCAGCCTGT TCGGCGTGGT GACGCAGCCG CGTCCGGTGC AAAGGGAACT GCCGCTGTGG
ATGACCGTCG CCGGCAACCC CGAGACCTGG GTCGAGGCCG GGCGGCTGGG CATGAACGTG
CTGACCCACC TGCTGGGGCA GAGCATCGAT ACGGTGGAAA GCCGCATCAA GGACTATCAC
GCGGCGCTGC GCGAGGCCGG CCATGATCCG GCGCGCTTTA CCGTCACGCT GATGCTGCAC
ACCTGCCTGG CCGATGATCG CGAGACGGCG CGCGAGATCG CTCGCGAGCC GATGAAGAAC
TACCTGAAAA GCGCCGCGGC GCTGGTCAAG CAATATGCCT GGGACTTTCC GGCCTTTCGC
CGTCCGGCGG GCATGACCAA CCCGATGGCC ATCGACCTGG GTTCGCTGTC CGAAGAGGAG
CTGGATGGCA TCCTGGAATT CGCCTTCCTG CGCTATTTCG AGGATTCCGG CCTTTTCGGC
TCCATCGAGG ATGGCATCGC CCGGGTCGAG CAACTGAAGG CCATCGGCGT GGGCGAGATC
GCCTGCCTGA TCGACTATGG CATCGCACCC GAGCAGGTCA TGGCCGGTTT CCCGCTGCTG
GCGCGGCTGC GGGCCGAGGT GAACCCGCAT GGCGCGGAAC CCGAGGACGG CGATTTCTCG
ATCGCCGCAC AGATCCGGCG CTGGAAGGTG ACGCATCTGC AATGCACCCC CAGCATGGCG
CGGATCCTGG TCTCGGACCC GCAGGTCGCG GCGGCGATGG CGGGGCTGAA ATGCGTGATG
GTCGGCGGCG AGGCGCTGCC GCCCTCGCTG CTCTCCGAGA TCAAGGCGGC GACGCGCGCG
CGGGTGCTCA ACATGTATGG CCCGACCGAG ACGACGATCT GGTCCACGGT GGCCGACCTG
TCCGATGGCG CAGAGGTGAC GCTGGGCCGG CCGATCGCCA ATACCCAGGT CTATGTGCTG
GACGGCGACG GCGTGCCGGT GCCCCCCGGC GCGCAGGGCG AGCTTTGGAT CGGCGGTCAT
GGCGTTGCGC GGGGCTATTG GCGGCGCGAT GACCTGACGG CGGCGGCCTT CCGGCCCGAT
CCCTTCGTGC CCGCGGATCG TGCCGCGCCT TGGGGCGCGC GCATGTATCG CACCGGCGAT
CTGGTGCGTT GGCGCGAGGA TGGCGGGCTG GACTATATCG GCCGGGCCGA TCACCAGGTA
AAGCTGCGCG GTTTCCGCAT CGAACTGGGC GAGATCGAGG CGCAACTGGC GGCCCTGCCC
GGCGTGCGCG AGGCGGTGGC GCTGGTGCGC GAGGACACGC CCGGCGACAA GCGGCTGGTG
GCCTATGTCA CCGGCGCTGG CGATCTGTGC GAAAAGGCGC TGCGCGAGGC GCTGGTCGCG
CATCTGCCGG CGCATATGGT GCCGGGGCGG ATCGTGCGGC TGGAAAAGAT GCCGCTGACC
CCCAACCGCA AGATCGACCG CAAGCACCTG CCGGTGCCGG GGACTGTCGC CCTGGTCCCG
ACCGCGGCTG CTCCGGCGGC CGTCGAGACC GCCACCGCTG CCGCAAATGC CGCTCCGACC
GAGGATCTGG CGCAGGCGGT GCAGGCGCTC TGGTCCGAGG TGCTGGGCGT GGAGCAGATC
GGCCCGCGCG ACAATTTCTT TGCGCTGGGC GGGCATTCGC TGCTGGCGAT CCAGCTGCAC
CGGACCATGC GCGACCGGCT GGCACTGCCG CGGCTGGGGG TGACGGATAT CTTCCGCTTC
CCGGTCATGG CGGACTTCCT GAAGCATGTC GCCTCGCTGG CGCCGGCGAA CAGCACCGCG
CCGGCGGCGC CCGTCGCTGC GCCGGTGGCC GCCGCTCCGG CGATGGCGCC CGAGCCGGCT
CTGGCGGCCG ACGATGCCAT GGCCCGGCGC CGGGCCTTGC GGGCGCAGTT GCGCGGTGCG
CGGTGA
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| Protein sequence | MTQFSAILVG NESLLRHAAE TLLARGHRIA AVVTRNPDLR DWAQGAGLAV EDQDAPMAPD
ALSADWLFSV ANLSILRPEM LARGRLGAIN FHDGPLPKLA GLNAPVWAII GDEPQHGITW
HMIEGGVDEG DILTQRLFEI RPDDTALTLN ARCFARGAES FADVVAQLEG AGPQRVRQDL
SLRSYVGRDK RPEAAAVLDF TQPAARIGAL VRGLDHGGYW NPLAMPKVKL ADSVLLVTGF
EGVEPASAPP GTVLSHDGAS ALIAAADGAV RLQFAGALPP VGVVVPALST EEHAHLTALG
EQAAKHDGFW RARLARMNPA VLPGEDSGSI RRVQLMPGAA PERIALAAAL LARLAGQAGF
DLALRPQGRP EAAGIVADWQ PLAVEAAGDR TLADLGQALA GQIADQAKRG FFMADLLHRA
PELRDMAVPD LAISLDARGP VKGAALTVTL SENGAWLDHD PARVTSAQTQ RLARALDGGL
ALPGATALRD IPLMDAGERE ELLVARNATQ VDVRLACIHE LIAEMAGADP DAVALAFEDR
TLTRGQLDRA ANALAAKLVQ MGVGPDQPVG LFARRSPELV IGALAIWKAG GAYVPLDPDY
PADRIELYIE DSGAGVVLVQ DGLADRLPAH GAQVVTIPTD LPHGMVAAPV SAVGPQNLAY
LIYTSGSTGR PKGVMVEHRN VANFFAGMDA VIPHQQGDAW LAVTSLSFDI SVLEIFWSLA
RGLRLVIAGE ESRLAVSSAP AQPRREVSGG MDFSLFYWGN DDGPGPKKYQ LLLEGARFAD
QNGFVAVYTP ERHFHAFGGP YPNPAVSGAA VAAVTKNVAV RAGSCVLPLH HPARVAEEWA
VIDNLTSGRA GLAIASGWQP DDFVLRPENA PPNNKAALAE GVDQLRRLWR GEAVEFPRKD
GSLFGVVTQP RPVQRELPLW MTVAGNPETW VEAGRLGMNV LTHLLGQSID TVESRIKDYH
AALREAGHDP ARFTVTLMLH TCLADDRETA REIAREPMKN YLKSAAALVK QYAWDFPAFR
RPAGMTNPMA IDLGSLSEEE LDGILEFAFL RYFEDSGLFG SIEDGIARVE QLKAIGVGEI
ACLIDYGIAP EQVMAGFPLL ARLRAEVNPH GAEPEDGDFS IAAQIRRWKV THLQCTPSMA
RILVSDPQVA AAMAGLKCVM VGGEALPPSL LSEIKAATRA RVLNMYGPTE TTIWSTVADL
SDGAEVTLGR PIANTQVYVL DGDGVPVPPG AQGELWIGGH GVARGYWRRD DLTAAAFRPD
PFVPADRAAP WGARMYRTGD LVRWREDGGL DYIGRADHQV KLRGFRIELG EIEAQLAALP
GVREAVALVR EDTPGDKRLV AYVTGAGDLC EKALREALVA HLPAHMVPGR IVRLEKMPLT
PNRKIDRKHL PVPGTVALVP TAAAPAAVET ATAAANAAPT EDLAQAVQAL WSEVLGVEQI
GPRDNFFALG GHSLLAIQLH RTMRDRLALP RLGVTDIFRF PVMADFLKHV ASLAPANSTA
PAAPVAAPVA AAPAMAPEPA LAADDAMARR RALRAQLRGA R
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