Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0688 |
Symbol | |
ID | 4578758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 669482 |
End bp | 670411 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639768006 |
Product | hypothetical protein |
Protein accession | YP_914496 |
Protein GI | 119383440 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.17746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.110027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATGGCTG CCCGGGGTTT CAGGGGGTTG CTTCTCGCGG CGGGGCTCGC GCTGGCGGCC TGGCCCGTGG CGGCGCAGGA CGCACAGACC CTGGCCGACA TCCGGACCGA GCTGAACCAG CTTTCGGCGG ACCTGCAAAG CCTGCGCGCG CAGCTTGTCG CCTCGGGGCC GGCGGGCTTT GCGGCGGCGG GCGGCGACAG CGCCATCGAC CGCATGAACG CCATGGAGGC GCGGCTGGCG CAATTGACCG GCCAGACCGA GCAGTTGCAG AACCGCATCG ACCGCATCGT CAGGGACGGC ACCACCCGCA TCGGCGACAT CGAGTTCCGC CTTTGCGAGA TGGAGGAGGG CTGCGACCTT GGCAGCCTGA CCACGCCGAC GCTGGGCGCG CAGGGCGGCG GGTCGGCACC CTTGCCGTCT TCGGACCAGC AGGGCGCGCT GACACAGTCC AAACCCCCTT CGGCCGGGGC TGCCGCGACC GCGGCGGAAA AGGCCGATTT CGACCGGGCC CGGGAGGTGC TCGGTCAAGG TGACTTTCGT CGTGCTGCAG AGCTCTTTGC GGCCATTGCC GAAACCCATG TTGGCGGCCC GCTGACCGCC GAGGCGCTGT TCCTGCGCGG GACGGCGCTT GATTCCGCAG GCGATCTGGA AGGGGCGGGC GTGGCCTGGC TGGAAAGCTT TGCCGCCAAC CCGAACGGCC CGCAGGCGGC GGATGCGTTG CTGGGCCTGT CGCGGGCCAT GTCGGCCAAG GCCGGCCCGC AGGAAGGCTG CTTCTATCTT CAGGAAATCA TCGCCCGCTT CCCCAGCGCT CCGCAGGCTG CCGAGGCCGA GCGGCGCATC GCCGATACCG GCTGCGACGC GCCGGTCGAT GAGGACCCTG CCGGGGAGTT GGACCCCGAG GCTGCGGCGG ATCTGGCGGA TGACGGCTGA
|
Protein sequence | MMAARGFRGL LLAAGLALAA WPVAAQDAQT LADIRTELNQ LSADLQSLRA QLVASGPAGF AAAGGDSAID RMNAMEARLA QLTGQTEQLQ NRIDRIVRDG TTRIGDIEFR LCEMEEGCDL GSLTTPTLGA QGGGSAPLPS SDQQGALTQS KPPSAGAAAT AAEKADFDRA REVLGQGDFR RAAELFAAIA ETHVGGPLTA EALFLRGTAL DSAGDLEGAG VAWLESFAAN PNGPQAADAL LGLSRAMSAK AGPQEGCFYL QEIIARFPSA PQAAEAERRI ADTGCDAPVD EDPAGELDPE AAADLADDG
|
| |