Gene Pden_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0688 
Symbol 
ID4578758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp669482 
End bp670411 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID639768006 
Producthypothetical protein 
Protein accessionYP_914496 
Protein GI119383440 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.17746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.110027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGCTG CCCGGGGTTT CAGGGGGTTG CTTCTCGCGG CGGGGCTCGC GCTGGCGGCC 
TGGCCCGTGG CGGCGCAGGA CGCACAGACC CTGGCCGACA TCCGGACCGA GCTGAACCAG
CTTTCGGCGG ACCTGCAAAG CCTGCGCGCG CAGCTTGTCG CCTCGGGGCC GGCGGGCTTT
GCGGCGGCGG GCGGCGACAG CGCCATCGAC CGCATGAACG CCATGGAGGC GCGGCTGGCG
CAATTGACCG GCCAGACCGA GCAGTTGCAG AACCGCATCG ACCGCATCGT CAGGGACGGC
ACCACCCGCA TCGGCGACAT CGAGTTCCGC CTTTGCGAGA TGGAGGAGGG CTGCGACCTT
GGCAGCCTGA CCACGCCGAC GCTGGGCGCG CAGGGCGGCG GGTCGGCACC CTTGCCGTCT
TCGGACCAGC AGGGCGCGCT GACACAGTCC AAACCCCCTT CGGCCGGGGC TGCCGCGACC
GCGGCGGAAA AGGCCGATTT CGACCGGGCC CGGGAGGTGC TCGGTCAAGG TGACTTTCGT
CGTGCTGCAG AGCTCTTTGC GGCCATTGCC GAAACCCATG TTGGCGGCCC GCTGACCGCC
GAGGCGCTGT TCCTGCGCGG GACGGCGCTT GATTCCGCAG GCGATCTGGA AGGGGCGGGC
GTGGCCTGGC TGGAAAGCTT TGCCGCCAAC CCGAACGGCC CGCAGGCGGC GGATGCGTTG
CTGGGCCTGT CGCGGGCCAT GTCGGCCAAG GCCGGCCCGC AGGAAGGCTG CTTCTATCTT
CAGGAAATCA TCGCCCGCTT CCCCAGCGCT CCGCAGGCTG CCGAGGCCGA GCGGCGCATC
GCCGATACCG GCTGCGACGC GCCGGTCGAT GAGGACCCTG CCGGGGAGTT GGACCCCGAG
GCTGCGGCGG ATCTGGCGGA TGACGGCTGA
 
Protein sequence
MMAARGFRGL LLAAGLALAA WPVAAQDAQT LADIRTELNQ LSADLQSLRA QLVASGPAGF 
AAAGGDSAID RMNAMEARLA QLTGQTEQLQ NRIDRIVRDG TTRIGDIEFR LCEMEEGCDL
GSLTTPTLGA QGGGSAPLPS SDQQGALTQS KPPSAGAAAT AAEKADFDRA REVLGQGDFR
RAAELFAAIA ETHVGGPLTA EALFLRGTAL DSAGDLEGAG VAWLESFAAN PNGPQAADAL
LGLSRAMSAK AGPQEGCFYL QEIIARFPSA PQAAEAERRI ADTGCDAPVD EDPAGELDPE
AAADLADDG