Gene Pden_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0500 
Symbol 
ID4581042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp472955 
End bp473434 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID639767817 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_914308 
Protein GI119383252 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGG CCAAGAACAC CATCTGCCTT TGGTATGACA AGGATGCCGA GGCGGCCGCC 
CGTTTCTATG CCGAGACCTT TCCCGACAGC GCAGTCACCG CGGTGCGCCA TGCGCCCAGC
GACTTTCCCT CGGGCAAGGC GGGCGATGTG CTGCTGGTCG AATTCACTGT CGCAGGCATA
CCCTGCCTCG GCCTGAACGG CGGCCCGACA TTCCGGCATA ACGAGGCGTT CTCGTTCCAG
ATCGCCACCG ATGACCAGGA GGAAACCGAC CGCTACTGGA ATGCGATCGT CGGCAATGGC
GGCCAGGAAA GCGCCTGCGG CTGGTGCAAG GACAAGTGGG GCGTCTCGTG GCAGATCACC
CCGCGCGTGC TGACCGACGC GCTGGCCGCC GGCGGTGACG AGGCGAAACG TGCCTTCGAT
GCGATGATGG AGATGACCAG GATCGACGTT GCGGCCATCG AGGCGGCCCG GCGCGGTTGA
 
Protein sequence
MTMAKNTICL WYDKDAEAAA RFYAETFPDS AVTAVRHAPS DFPSGKAGDV LLVEFTVAGI 
PCLGLNGGPT FRHNEAFSFQ IATDDQEETD RYWNAIVGNG GQESACGWCK DKWGVSWQIT
PRVLTDALAA GGDEAKRAFD AMMEMTRIDV AAIEAARRG