Gene Pden_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0446 
Symbol 
ID4578849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp415141 
End bp416178 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content58% 
IMG OID639767764 
Productzinc finger, CHC2-family protein 
Protein accessionYP_914256 
Protein GI119383200 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.417921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACGAA AGAGGTATGA TCTCGAACGG ATCAAGGCGA TCCCGATTGC CACGGTCGCA 
GCGGATCTCG GCTTCGCACT CTCGCCGAGG GGAACCGGAC GTTGCCGACT ACCTGGACAC
CCGGATCAAC GGCCTTCCTT CTCGCTGCGT TCGATCAGTA ATGGCTTCTC CTGCTTCGGC
TGTCAGCGTT CCGGAAGTGT AATCGACCTC GTCATGGCGA TGGACAATCT CGACTTCTTG
GCGGCCTGCC GCTGGCTGGA TGATAACTAT CTCAACAGCA TCAGCGCCCA GCCCCGATCA
AGACGCCGAC CATCGACCAT CCAGCAAACT TTGCCGGTTC CGGTGCAGTC TTCGTCTCAC
GGCATGGCCC CCGAAGTCTA CGGTTGGATT CTCGATCAGT CGCCGCTTTC CGCGAGCGGC
AGAGCTTATC TCCAACGACG AGCTTTCAGC GCCGAGACCA TTGCACACTT CCGAGTTGGT
CAGATTGGTG ATCGCACCAG CTTGTTTCGA CGCGCGCTAT CGGCTTTCGG AATGCCGCGT
CTCGAGGAAG CGGGCCTTGT CATGCAGGGG CGCTATGGGC CACTACTTTG CTTGCCGTCG
AACTATCTAC TCTTTCCCTT CTTGCAGGAC GGCACAGTCA CCTACCTCCA GGCTCGTCGC
GCGGACGACG GCAAGGAATA TCGTTGGTTC TGCCCGGCGA AGCTCCTGCC GCCTCCCTAC
AATCTTGATG CGCTCGCCAA GCCAGGGTCG ACCATCACTA TCTGTGAAGG GATCACTGAC
GTGCTCTCGG CGCATGAACT TGGCATGCTT CCGATTGGGC TTCTTGGCGC GATGCGCAAC
CTTGGAACTG ATATAATCGA CCGCCTCATA GGCCGTAACG TCGCGATATT CGCCGATGCT
GATCGGTCGG GGCGTAGTCT GGCCAAGAGG CTTAGCGACC GGCTTGCTGC GCGCGGTATT
ACGGTAGTTA CCAAGCAGTT GCCACCAGAG GTCAATGATC TGAACGATTA TCTCCGATCG
CGGCGAGGCA TAGCATGA
 
Protein sequence
MSRKRYDLER IKAIPIATVA ADLGFALSPR GTGRCRLPGH PDQRPSFSLR SISNGFSCFG 
CQRSGSVIDL VMAMDNLDFL AACRWLDDNY LNSISAQPRS RRRPSTIQQT LPVPVQSSSH
GMAPEVYGWI LDQSPLSASG RAYLQRRAFS AETIAHFRVG QIGDRTSLFR RALSAFGMPR
LEEAGLVMQG RYGPLLCLPS NYLLFPFLQD GTVTYLQARR ADDGKEYRWF CPAKLLPPPY
NLDALAKPGS TITICEGITD VLSAHELGML PIGLLGAMRN LGTDIIDRLI GRNVAIFADA
DRSGRSLAKR LSDRLAARGI TVVTKQLPPE VNDLNDYLRS RRGIA