Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0446 |
Symbol | |
ID | 4578849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 415141 |
End bp | 416178 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639767764 |
Product | zinc finger, CHC2-family protein |
Protein accession | YP_914256 |
Protein GI | 119383200 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.417921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCACGAA AGAGGTATGA TCTCGAACGG ATCAAGGCGA TCCCGATTGC CACGGTCGCA GCGGATCTCG GCTTCGCACT CTCGCCGAGG GGAACCGGAC GTTGCCGACT ACCTGGACAC CCGGATCAAC GGCCTTCCTT CTCGCTGCGT TCGATCAGTA ATGGCTTCTC CTGCTTCGGC TGTCAGCGTT CCGGAAGTGT AATCGACCTC GTCATGGCGA TGGACAATCT CGACTTCTTG GCGGCCTGCC GCTGGCTGGA TGATAACTAT CTCAACAGCA TCAGCGCCCA GCCCCGATCA AGACGCCGAC CATCGACCAT CCAGCAAACT TTGCCGGTTC CGGTGCAGTC TTCGTCTCAC GGCATGGCCC CCGAAGTCTA CGGTTGGATT CTCGATCAGT CGCCGCTTTC CGCGAGCGGC AGAGCTTATC TCCAACGACG AGCTTTCAGC GCCGAGACCA TTGCACACTT CCGAGTTGGT CAGATTGGTG ATCGCACCAG CTTGTTTCGA CGCGCGCTAT CGGCTTTCGG AATGCCGCGT CTCGAGGAAG CGGGCCTTGT CATGCAGGGG CGCTATGGGC CACTACTTTG CTTGCCGTCG AACTATCTAC TCTTTCCCTT CTTGCAGGAC GGCACAGTCA CCTACCTCCA GGCTCGTCGC GCGGACGACG GCAAGGAATA TCGTTGGTTC TGCCCGGCGA AGCTCCTGCC GCCTCCCTAC AATCTTGATG CGCTCGCCAA GCCAGGGTCG ACCATCACTA TCTGTGAAGG GATCACTGAC GTGCTCTCGG CGCATGAACT TGGCATGCTT CCGATTGGGC TTCTTGGCGC GATGCGCAAC CTTGGAACTG ATATAATCGA CCGCCTCATA GGCCGTAACG TCGCGATATT CGCCGATGCT GATCGGTCGG GGCGTAGTCT GGCCAAGAGG CTTAGCGACC GGCTTGCTGC GCGCGGTATT ACGGTAGTTA CCAAGCAGTT GCCACCAGAG GTCAATGATC TGAACGATTA TCTCCGATCG CGGCGAGGCA TAGCATGA
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Protein sequence | MSRKRYDLER IKAIPIATVA ADLGFALSPR GTGRCRLPGH PDQRPSFSLR SISNGFSCFG CQRSGSVIDL VMAMDNLDFL AACRWLDDNY LNSISAQPRS RRRPSTIQQT LPVPVQSSSH GMAPEVYGWI LDQSPLSASG RAYLQRRAFS AETIAHFRVG QIGDRTSLFR RALSAFGMPR LEEAGLVMQG RYGPLLCLPS NYLLFPFLQD GTVTYLQARR ADDGKEYRWF CPAKLLPPPY NLDALAKPGS TITICEGITD VLSAHELGML PIGLLGAMRN LGTDIIDRLI GRNVAIFADA DRSGRSLAKR LSDRLAARGI TVVTKQLPPE VNDLNDYLRS RRGIA
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