Gene Pden_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0410 
Symbol 
ID4578697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp379720 
End bp380193 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID639767727 
ProductAsnC family transcriptional regulator 
Protein accessionYP_914220 
Protein GI119383164 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.864347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA AGATCTTTTC AATCGATGAA ATCGACAACC GCCTGTTGTC GCTGTTGCAA 
CGCGATGCCA GCCTGTCGCA GCGCGAGCTG GCCGAGCGGG TGGGCCTGTC GCAGAATGCC
TGCTGGCGGC GGTTGCAGCG GTTGACCGAG GCCGGCGTGC TGCAAGGCAG CCGCGCGGTC
ATCGATGCGG CTGCGTTGGG GCTGGGGCTG ACGGTCTTTG TCATGATCCG CACCCGGCAT
CACGACGACG CCTGGGCGCG GCGCTTTCGC GCCCGCATCG AATCGCTGCC GCAGATCACC
GAGTTCCACC GCATCGGCGG CGAATGGGAT TACATGGCCA AGGCGGTGGT GGGTGGCATG
GCGGGCTATG ACGCGCTCTA CAAGCGCCTG ATCGCCGACA TGGATCTGGA ACGCGTGACC
GGCGTTTTCT CGATGGAGAC GATCTTCGAG GGCCGGCCGC TGGCGCCGGC TTGA
 
Protein sequence
MNDKIFSIDE IDNRLLSLLQ RDASLSQREL AERVGLSQNA CWRRLQRLTE AGVLQGSRAV 
IDAAALGLGL TVFVMIRTRH HDDAWARRFR ARIESLPQIT EFHRIGGEWD YMAKAVVGGM
AGYDALYKRL IADMDLERVT GVFSMETIFE GRPLAPA