Gene Pden_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0285 
SymboleutB 
ID4580190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp262931 
End bp263887 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content73% 
IMG OID639767600 
Productthreonine dehydratase 
Protein accessionYP_914095 
Protein GI119383039 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR02991] ectoine utilization protein EutB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.832074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA CGCTGGACGA CATCCGCGCC GCCGCCGGGC GCATCCGGGG CCATGTGGTG 
GAAACCCCGC TGGTCCGTGA CGAGGTGCTG TCGGCGCGGC TGGGCCAGCC GGTCTGGCTG
AAATGCGAAT ACCGCCAGGC CACCGGCGCC TTCAAGCTGC GCGGCGCGAC CAACGCGATC
CTGTCGCTTG CGCCCGATGC GCTGGCGCGC GGCGTGGTCA CCGCCTCGAC CGGCAATCAC
GGCCGCGCCT TGGCCCATGC CGCCCGCGCG CTGGGCGTGC CCGCCACCGT CTGCCTGTCG
CGGCTGGTGC CGGGCAACAA GGTCCAGGCG ATCCGCGACC TGGGGGCCAC GGTCCGCATC
ACCGGCGCCA GCCAGGACGA GGCGATGGTC GAGGTCGCCC GCGCCGTGGC GCAAGAGGGC
ATGACCGAGA TCCCGCCCTT CGACCATGAG GCGGTGGTCG CCGGCCAGGG CACGCTGGGG
CCGGAGATCG CGCCCCTGAC CCCCGATGCG GTGCTGGTGC CGCTGTCCGG CGGCGGGCTT
GCGGCCGGGG TCGCGGTGTC GATCAAGGCG CTGTCGCCCG CCACGCGCGT CATCGGCCTG
ACCATGGAGA ACGGCGCCGC GATGGCCGCG AGCCTTGCCG CCGGCCATCC GGTCGAGGTT
GCCGAAAGCC CCAGCCTCGC CGACAGCCTT GGCGGCGGCA TCGGATTGCA GAACCGCGTG
ACCTTTGCGA TCTGCCGCGA CCTGCTGGAC GATGCGATCC TGCTGACCGA GGCCGAGATC
GCCGAGGGCA TCCGCCATCT GGGCCGCGCC GGCCATGTCG TCGAGGGCGC GGCCAGCGTC
GGCACCGCCG CGATGCTGGC GGGCAAGTTC GTCCCGCAGG GCCCGACCGT CACCATTCTT
TCCGGCGCGA ATATCGACCC CGCGCTGCAT GCCCGCATCA TGGCGGAGGC CGCATGA
 
Protein sequence
MSVTLDDIRA AAGRIRGHVV ETPLVRDEVL SARLGQPVWL KCEYRQATGA FKLRGATNAI 
LSLAPDALAR GVVTASTGNH GRALAHAARA LGVPATVCLS RLVPGNKVQA IRDLGATVRI
TGASQDEAMV EVARAVAQEG MTEIPPFDHE AVVAGQGTLG PEIAPLTPDA VLVPLSGGGL
AAGVAVSIKA LSPATRVIGL TMENGAAMAA SLAAGHPVEV AESPSLADSL GGGIGLQNRV
TFAICRDLLD DAILLTEAEI AEGIRHLGRA GHVVEGAASV GTAAMLAGKF VPQGPTVTIL
SGANIDPALH ARIMAEAA