| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0250 |
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| Symbol | |
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| ID | 4579743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 232852 |
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| End bp | 233715 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767565 |
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| Product | DNA-binding transcriptional repressor RpiR |
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| Protein accession | YP_914060 |
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| Protein GI | 119383004 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGAC ATTACGATCC GCGCACGGTG GGCGCCCAGA TCCGGATGAA GCTTCCGTTT
CTGACTCCGC TGGAGGCGCG GGTCGTCGAT ACCATTACCG GCCGCAACGA CCTGGACCTG
ACCACCGCCC TGCGGCAGGT ATCCGAAGAT GCCGGCGTTT CCGATGCCAT GGTGGTCAAG
ATCGCGAAGA AGCTGGGCTT CAACGGTTTT CGGGACTTCC GCGAAGCTCT GGTCGTCTAT
CGCCAGACCG ATGTCGCGTC CCTGCACAGC GAGATATCGC CCGAAGACAG TTCGGCCGAC
ATCATCCGCA AGGTGTTCCA GACCTCGATA CAGGCGCTGG AAGAAACCAT GTCCATCATC
GACGTCTCGG CTTTCGATCG CGCGGCCACC CTGCTCCATG GCGCGCGGCA GCGCGATTTC
TACGGCGTCG GCGGCTCGGC CCAGATCGCG CGGGATGTGG CGCACAAGTT CCTGCGCATC
GGTCTTCGCG CCGGGGTCCA GGACGATCCG CACATGATGC TGATGTCCGC CGCCCTGCTA
GGGCCAGAGG ACGTCGTGGT CGCATTCAGC CATTCCGGCA CCACCTCGAA CGTGATCGAG
GCCGCACGGC TGGCCCGCCA GCAGGGGGCG CGGGTGATCG CGATCACCAA TTACGCCACC
GCGCCCCTGT CCGAGCTGGC CGACATCGCG CTGTGTTCGA CCGCGCAGGG CTCTCCCCTC
CTGGGCGAAA ATGCCGCCGC GCGGATCGCG CAACTGAACA TCATGGACGC GATCTTTGTC
GCCGTCGCGC AGCGCGACCT GGAACGGGCC GAGGCGCAAC TGGCCCGGAC CCGCAATGCC
GTGGACAACA AGCGCCGCAG ATAA
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| Protein sequence | MMGHYDPRTV GAQIRMKLPF LTPLEARVVD TITGRNDLDL TTALRQVSED AGVSDAMVVK
IAKKLGFNGF RDFREALVVY RQTDVASLHS EISPEDSSAD IIRKVFQTSI QALEETMSII
DVSAFDRAAT LLHGARQRDF YGVGGSAQIA RDVAHKFLRI GLRAGVQDDP HMMLMSAALL
GPEDVVVAFS HSGTTSNVIE AARLARQQGA RVIAITNYAT APLSELADIA LCSTAQGSPL
LGENAAARIA QLNIMDAIFV AVAQRDLERA EAQLARTRNA VDNKRRR
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