Gene Pden_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0229 
Symbol 
ID4580809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp209861 
End bp210658 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID639767544 
Productxylose isomerase domain-containing protein 
Protein accessionYP_914039 
Protein GI119382983 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC CGCTTCACCA CATGGACTTC ATCTTCCAGA CCAAGCTGGG GACCTATCCG 
CTGGCCGCCC AATGCGAGAT GCTGGCCGAA CTCGGCTATC AGGGCCTCAC CGTTTCGGCC
TGGAGCAAGG AGCTGGACGC GCTGGCCTCG GTGAAGCCGC GATGGGGGCT GGATGTGGGC
GCGATCTACC TGATCTATGG CAGGGGGCTT GAAGATTTCG TCACCCGCAT TTTCGAAACC
GCCGAAGGCT GCACGCGGAT CGAACTGGCG CTGGATTCCG GCGATGGCGT CACGGATGCC
GACCTGCGGA TGATCGAGCG TCTGTTGCCG ATCTGCGAAC GCCGGGGCAT CGACATCGCG
CTGTATCCGC ACGGCCGCTA CGGGATGCAG ACGACCACCG AGGCCGTTGC CCTGTGCCAG
CGCTTCGATC ACCCGGCCCT GGGCATCGTG TTCAATGGCT ATCACTGGTA TGCGATGCAG
GAAGGATCGC TGGATGCGCG TCTCGACGCG CTGTGGCCGT GGCTGCGGCA GGTCAATCTT
GCCGGATGCC GCATGTCGCC CCTGGGCTGG GGCGGGCTGG CCACCATCGA GCCGCTCGAC
GAGGGCGAGA TGGACAATTT CGTGCTGCTC GGCGCGCTCG AGCGGCGCGG GTTCAAGGGA
CGCTGCGGCG TGCTGGGCTG GGAAAGCATG GGCGGCGATG TCTATGGCAA TCTGCAACGC
TCGATGACCG CCTTCCGCTC GATGGAGGCG CGGCTGGCCG CGCATCCGGG CTGGGCCGTC
ATGACGCAAC TGACCTGA
 
Protein sequence
MNLPLHHMDF IFQTKLGTYP LAAQCEMLAE LGYQGLTVSA WSKELDALAS VKPRWGLDVG 
AIYLIYGRGL EDFVTRIFET AEGCTRIELA LDSGDGVTDA DLRMIERLLP ICERRGIDIA
LYPHGRYGMQ TTTEAVALCQ RFDHPALGIV FNGYHWYAMQ EGSLDARLDA LWPWLRQVNL
AGCRMSPLGW GGLATIEPLD EGEMDNFVLL GALERRGFKG RCGVLGWESM GGDVYGNLQR
SMTAFRSMEA RLAAHPGWAV MTQLT