8 homologs were found in PanDaTox collection
for query gene Pden_0128 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_0128  hypothetical protein  100 
 
 
88 aa  176  9e-44  Paracoccus denitrificans PD1222  Bacteria  normal  0.281023  normal  0.647835 
 
 
-
 
NC_008687  Pden_3366  hypothetical protein  87.5 
 
 
88 aa  154  4e-37  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.104569 
 
 
-
 
NC_011365  Gdia_2795  hypothetical protein  43.66 
 
 
71 aa  45.8  0.0002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.308254  normal 
 
 
-
 
NC_009511  Swit_3681  hypothetical protein  35.21 
 
 
258 aa  43.5  0.0009  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1049  hypothetical protein  32.53 
 
 
346 aa  41.2  0.004  Ralstonia pickettii 12D  Bacteria  normal  0.0179833  normal  0.0257011 
 
 
-
 
NC_008687  Pden_3173  hypothetical protein  32.95 
 
 
102 aa  40.8  0.006  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.839381 
 
 
-
 
NC_008254  Meso_3837  hypothetical protein  32 
 
 
96 aa  40  0.009  Chelativorans sp. BNC1  Bacteria  normal  0.0738372  n/a   
 
 
-
 
NC_009668  Oant_3181  hypothetical protein  28.09 
 
 
98 aa  40  0.01  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0188675  n/a   
 
 
-
 
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