Gene Pden_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0117 
Symbol 
ID4580895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp109037 
End bp109393 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content65% 
IMG OID639767435 
Producthypothetical protein 
Protein accessionYP_913930 
Protein GI119382874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.810886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0211682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA TCGCACCGCA ACCCCGGATC AAGCTGTCGA AGCTGCGCGA TATCGGCTGG 
TCGCTCTGGG ATCCCATCGG GCTGCTGGAC CCGGAAAGCC GGGCGGGCAG GTGGGACGAC
GAGGCCAACC TGTCCTTCGC GGACGAATAT GACGGCTATC TGATCGCGGC GGCCTCGCAA
CTGCGCCGGG GAACGCCCCG CGATGAGGTG GTCGCATTCC TGGTCGATAT CGAGACCCGG
CATATGGCGA TGCGCGACAG CCCGAGTGTT CGGCTGAGGG CGGAAGCGGT CGTTGAGGCG
ATCCTGGCTG ACGAGACCAT CTGGACATGG CCCGATGCGC AGGGGCGGTT CGGTTAG
 
Protein sequence
MTEIAPQPRI KLSKLRDIGW SLWDPIGLLD PESRAGRWDD EANLSFADEY DGYLIAAASQ 
LRRGTPRDEV VAFLVDIETR HMAMRDSPSV RLRAEAVVEA ILADETIWTW PDAQGRFG