Gene Pden_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0114 
Symbol 
ID4580892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp106933 
End bp107211 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content62% 
IMG OID639767432 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_913927 
Protein GI119382871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.348702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0079978 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAACTC ATCTTGCTGC TCTTCTCGCT CTCATGGTCG CCGCCGGATG CGCGGTCGGT 
TCCGGTGCAG TGGTCAAGGG CGTCGGGCCA GGCGATCTGC TGAAGCTTCG CGAGGGTCCA
GGTCTCGAGC ATAACATCAT CATCGGCTTG CCCGACGGAA CGCGCCTTAC CCGCCAGAAC
TGCGTCACGA ATAACGGCAA GGTCTGGTGC AGAGTCTTCC TCACCGACCG GCCTGCCATC
TCGGGTTACG TTTCAGCGGA CTACCTGGCG CATCGCTGA
 
Protein sequence
MRTHLAALLA LMVAAGCAVG SGAVVKGVGP GDLLKLREGP GLEHNIIIGL PDGTRLTRQN 
CVTNNGKVWC RVFLTDRPAI SGYVSADYLA HR