Gene Pden_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0011 
Symbol 
ID4578552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp9924 
End bp10529 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID639767322 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_913824 
Protein GI119382768 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGGC TGACCGAAAG AAAGCTGCTG GTCGCCACGC ATAACAAGGG CAAGCTGGAC 
GAGATCCGCG CCATGATGGC CCCGCATGGC ATCGAGGTGA CCTCGGCCGG CGAGATGGGC
CTGCCCGAAC CGGCCGAGAC CGAGTCGAGC TTCATCGGCA ATGCCCGCAT CAAGGCTCGC
GCCGCCATGC AGGCGACCGG CTTGCCGGTG CTGGCCGATG ACAGCGGCAT CACGGTGGAC
GGGCTGGACG GTGCGCCCGG CGTTTATACC GCGGACTGGG CAGAGACGCC GAATGGCCGT
GACTTCATGC AGGCCATGAC CCGCACCTGG ACCGAACTGG ACGAGCGCGG CGCCCCCGAG
CCTCGCACCG CCCAGTTCCG TGCCACGCTG ATCCTGCTCT GGCCCGATGG GCATGAGGAG
ATCTTCGAGG GCGTGGCACC CGGTCGCCTG GTCTGGCCGC CGCGCGGTGC GCATGGCCAT
GGCTACGACC CGATCTTCGT GCCCGACGGC CACGATGTGA CCTATGCCGA GATGCCGTCC
GAGCAGAAGA ACGCCATCAG CCACCGCGCC CGCGCCTTTC GCAAGCTGGA GACGCTCTTT
GCGTAG
 
Protein sequence
MRRLTERKLL VATHNKGKLD EIRAMMAPHG IEVTSAGEMG LPEPAETESS FIGNARIKAR 
AAMQATGLPV LADDSGITVD GLDGAPGVYT ADWAETPNGR DFMQAMTRTW TELDERGAPE
PRTAQFRATL ILLWPDGHEE IFEGVAPGRL VWPPRGAHGH GYDPIFVPDG HDVTYAEMPS
EQKNAISHRA RAFRKLETLF A