Gene Pcryo_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2162 
Symbol 
ID4035993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2648594 
End bp2649718 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content43% 
IMG OID637974635 
Productextracellular solute-binding protein 
Protein accessionYP_581423 
Protein GI93006986 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCATT TATCTTCATC CAATTGGTCT ACTCACGCCT CTATTAAAAT ACTGCCGAAA 
GCATTACTCT GTGCCGCCAT CGGGCTCTCT ATTACCAGCT GTAGCAAATC TGATAACGCG
CCTATCGATA GTTCTGCTAC CAGCGATGTC ACGTTGAACC TTTATAACTG GTCAGAGTAT
ATGCCGCAAG AAATACTTGA CGGCTTTACT GAAGAAACTG GTATCAAAGT CAATTACACC
ACCTTTGACT CTAATGAAGC CATGTATGCC AAGCTAAAGC TGCTTGATGA TTCTAGCCAA
TACGATTTGG CGATTCCATC GACGTATTAT GTCGAAAAAA TGGCAAAAGA AGGTCTGCTA
CAAGAGCTTG ATAAGTCTAA ATTGAGCAAT TTTAAAAACC TTGACACTTC TTTTACCAAT
ACCAAAGTTG ACCCAGAAAA CAAATACTCG ATTCCTTATA TGTGGGGCAG CACCGGTCTT
GCTATCAATG GCGAGACGGT TGATCCAGCC ACGGTCAATA GCTGGAATGA TTTATGGCGT
CCTGAGTATA AGGGTCAAGT GATGCTGATG AATGATATGC GCGAAGTGTT CGGCATGGCG
CTATTAACCC TAGGCTACTC TGGCAACAGT AGAAATCCTG ACGAAATTAA AGCCGCTTAT
GAGAAGCTCA CGACCTTGAT GCCGAATGTA AAAACCTTTA ACTCAGATGC TTCACGTATG
CCATATATGG AAGGTGAAAC CAGCGTCGGT ATGACGTGGA ATGGGGAAGC TATCATCGCC
AATAGTGAAG GTCTCACTAG CTTGGTGTAT AAATACCCAA CCGAAGGTGC GATATTATGG
ATGGACAATT TTGTCATTCC TAAAAACGCC ACGCAAGTCG ATGCAGCCCA CAAGTTCATA
GACTATCTGC TACGTCCTGA GAACTCCAAA ATTGTTAGTG AAGAGATAGG TTATGCGTCG
CCTAATATTG CGGCACGTGA AATGATGCCA GATGACGTCA AAAATAATCC AACCATCTAC
CCTAGTAAAG ACGTATTGGC AAAAGCTGAA TTCCAAGAAG ATGTTGGTGA TGAAGCATTG
CAGGTGTACC AACAGTATTG GGATAAGCTA AAAACTGGTC GTTAA
 
Protein sequence
MSHLSSSNWS THASIKILPK ALLCAAIGLS ITSCSKSDNA PIDSSATSDV TLNLYNWSEY 
MPQEILDGFT EETGIKVNYT TFDSNEAMYA KLKLLDDSSQ YDLAIPSTYY VEKMAKEGLL
QELDKSKLSN FKNLDTSFTN TKVDPENKYS IPYMWGSTGL AINGETVDPA TVNSWNDLWR
PEYKGQVMLM NDMREVFGMA LLTLGYSGNS RNPDEIKAAY EKLTTLMPNV KTFNSDASRM
PYMEGETSVG MTWNGEAIIA NSEGLTSLVY KYPTEGAILW MDNFVIPKNA TQVDAAHKFI
DYLLRPENSK IVSEEIGYAS PNIAAREMMP DDVKNNPTIY PSKDVLAKAE FQEDVGDEAL
QVYQQYWDKL KTGR