Gene Pcryo_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2079 
Symbol 
ID4034738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2545603 
End bp2546511 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content46% 
IMG OID637974552 
ProductLysR family transcriptional regulator 
Protein accessionYP_581340 
Protein GI93006903 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.399656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.607866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTT TACGTCAACT TGAGTTCGCC TTAGCCGTCG CCAAACACCG TCATTTTAAA 
CGTGCAGCAG AAGATTGTAA TATCTCGCAA TCAGCGCTGA GCTTGGGTAT CGCTGAGTTG
GAAAAACAGC TTGATACACA AATTTTTGAG CGAAATAATA AACAAGTCTT GATCACCCCT
ATCGGTGAAG ATATCTTGGT GCGGGCGCAG CGGGTGTTTT CTGAAGTCAA CGACTTGACC
ACCCGTGCGC ATAGCCATCA ATCGCCCCTT GCCTACCCTA TGACCGTTGG TATTATTCCA
ACGATTGCAC CTTATCTGCT ACCAAAAGTG TTGCCTGCGC TGCGTGAGCA CTATCCAGAA
TTTCGTATGA CTATCGTCGA GCAACAAACC GAACGCTTGC TTGAGCAAGT GCGTTATGGA
CATATTGATA CCGCTATTAT TGCACTACCT TATGCGGTAG ATGGTTTACA TAGTTTTGAG
TTTTGGAGCG AAGACTTCTT TGCCGTCTTT CCAAAAAATG ATGTACATGC CAAGCTCAAA
ACGATCAACG CTGATGAGCT GGCAACGGCA AATCTCATGT TACTTGGCGA AGGGCATTGC
TTGACTGACC AAACGCTATC TGTCTGCCAT TTTGACCGTG CGCAGATGAA ATCCAGCTTT
TCAGATGCCA GCTTAAACAC ACTTATTCAA ATGGCACTTG CTAATATGGG TACGACGTTA
GTGCCAGAAA TGGCGTTAGA CCAGCTGCAT CTACAGAACC AAAATGCGGT CGCTGTGCCA
CTGGCTGAGC AAGGCCCTCA TCGTCATATT GCCTTTGTCA CACGTCTAAA TTATGCCCGT
GTCGATGATG TCAATTTGCT TGGTAAAGTG TTTAAGCAGG CATTTGAAGA CGCTGCCAAT
AAGAAGTAA
 
Protein sequence
MITLRQLEFA LAVAKHRHFK RAAEDCNISQ SALSLGIAEL EKQLDTQIFE RNNKQVLITP 
IGEDILVRAQ RVFSEVNDLT TRAHSHQSPL AYPMTVGIIP TIAPYLLPKV LPALREHYPE
FRMTIVEQQT ERLLEQVRYG HIDTAIIALP YAVDGLHSFE FWSEDFFAVF PKNDVHAKLK
TINADELATA NLMLLGEGHC LTDQTLSVCH FDRAQMKSSF SDASLNTLIQ MALANMGTTL
VPEMALDQLH LQNQNAVAVP LAEQGPHRHI AFVTRLNYAR VDDVNLLGKV FKQAFEDAAN
KK