Gene Pcryo_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1944 
Symbol 
ID4034681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2398136 
End bp2399197 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content47% 
IMG OID637974416 
Producthypothetical protein 
Protein accessionYP_581205 
Protein GI93006768 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT TGCCAAAAGC TTTCACCGTA CCAGCCACTT CAGCATTAAG CCGTTGGTTC 
GCCTCGCGTG CGCCCAAAAG TGACAGCCCC AAACTCAATT TGCGTAATGT CTATATTTTT
TTTAGCCGGG AAGGCATGCT ATTTGCGGTG CTGCTGATCA TTACTTTTAT TGCCGGTATT
AACTATGGCA ATAACTTGGT ATTAGGTTTA TGTTTTTATT TGGTCAGCGT CTGGCTGATC
AGCTTTCATG TAACCTTTGC GCACATTTCA GGTTTGCAAG TACGTTTGCT TGAGGTGACT
ATGGCAGAAG CAGGTGCACC TGTTTGGGTG ACTTTGCAGC TGCGCAGTGA GAGCCGTCAA
CCAAGACGGC AGTTGTTATT TAGCTTTGAG CAGACTGATG ACAAGGCTAA TAGCAAGAAA
GATAAAAACA TCAGCAAAAA AATTAAACAT AGCGCTGATA ATAAACAGTC AATACTGGTG
ACACGACTGC AAAACGAGCA AATTATTCGC TTGCCTGTAC CGACCCAGAA TCGTGGGCAG
TTTGAATTAC CACGGTTGAA AATAAAAACG GTTTACCCTT TGGGCATTAT GCGGGCGTGG
TCTTACGTTT ATTTTGCCCG TACTGCTTGG GTCTATCCAA AACCTGAAGT ATTTGATTGG
CAAGCGCAGT ATGCAGTTGC CAGTCAGGAG GATTTACCAA CAGGCGGGCA ATATCGGCAA
GGTCAAGATG ACTTTGAGCG GCTAGATGTC TATATCGAAG GAGAGTCACT GGCACGGGTT
TCTTGGGGAC ATGTGGCACG CGGTCAGGGT ATGCTTACCA AGCATTTTGC CGATCCTGTT
GGTCACGAGC AAACCTTGGA TTATGCCGAT ATGCCAGCGG CTAATCATGA ACAGAAGCTG
GCACAACTGG CTCATGGCAC GCTCATATTA GGGCAATTGG GTGTGCCGTT TAATATGTGC
TTACCAAATG AGGCACCGTC TGAATTTTCC TCTGCGGTAA TGACGGGCGA GGGCGACAGC
TTTGCACAAG CTTGCTTACT AAGATTGGCA AAAGCGCCAT GA
 
Protein sequence
MSLLPKAFTV PATSALSRWF ASRAPKSDSP KLNLRNVYIF FSREGMLFAV LLIITFIAGI 
NYGNNLVLGL CFYLVSVWLI SFHVTFAHIS GLQVRLLEVT MAEAGAPVWV TLQLRSESRQ
PRRQLLFSFE QTDDKANSKK DKNISKKIKH SADNKQSILV TRLQNEQIIR LPVPTQNRGQ
FELPRLKIKT VYPLGIMRAW SYVYFARTAW VYPKPEVFDW QAQYAVASQE DLPTGGQYRQ
GQDDFERLDV YIEGESLARV SWGHVARGQG MLTKHFADPV GHEQTLDYAD MPAANHEQKL
AQLAHGTLIL GQLGVPFNMC LPNEAPSEFS SAVMTGEGDS FAQACLLRLA KAP