Gene Pcryo_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1801 
Symbol 
ID4034803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2223912 
End bp2225000 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content44% 
IMG OID637974270 
Productputative acyl-CoA dehydrogenase-related protein 
Protein accessionYP_581062 
Protein GI93006625 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.162926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCGT TAGATGCAAC AAATCCTTTA TTATCAGAGA TTAAAGCCAG TATAGACAAT 
ATCATACATA CTAATAATCA AACCATTAGG ACGCTTGGCT TAACTGATGC ATTACGTCAT
GACATTCTAA AAGCCTTAAT CACCTATAGC GAGAAAGTCC CGCATCCGGC AAGTGGTGCT
ACCAATGTAA ATGGTGCAAT ATCAAGCACA TTGATCCGTT GGCAAATTTT GGCTTATGTA
GCAGGTGTTG ATTTAACGAT TGCAAAATGG TTTGAGTCGC ACTTGGATGC GCTAAGTATT
TTACATGAGG TGGGCTATGA TAAAGCGGAT CAAGGGTTGT GGGCTGTTTG GGCAGCAGAG
GGTCACTCCA ATCCTATTCA TTATCAGCAG GGTAAAATCA GCGGTACAAA AGAGTGGTGT
TCTGGCGCCA ACATTGTTGA TCGCGCGCTA ATGACCTATC GTGATAAGAA TGGTCAATCG
CAGTTACTTA TTGTAGATAT GCAGCAAACT GGCATTGAGA TTGATAATGA GGAATGGCAG
GCGGTAGGGA TGCAAGCCAC TGATACAGCA ACTTTACAGT TTTTTAAGGT GACAGCCAGT
CAAGTTGGGA TAGCCAATGC TTATCTAGAA CGTGTGGGGT TTTGGCATGG AGCGGCAGGT
GTTGCTGCTT GCTGGTACGG GGCAACCGCT TACCTAGCAG ACTATTTAAT CAGCGCCTAT
GAGCAAAAAC CAAACGATTA TAAAGCGATG TATTTGGGTC AAATTAGTAC GGCATTGGCA
GTCACTCAGC AGTATTTTCG TTATGTTGCT GATTTAATAG ATAGCCAGCC ACAGCTGAGT
CATGAACTTG CCATACGCCA GCTAAAATTA CAAGTTGAGA AAGTCGCTCG CCAAGTAATG
GAGGTTGTCG GGCAGGCATT GGGAGCAGCA CCATTTTGTC GCAATGCCCA TTTTGCAAGA
TTGTCAGCCG ATCTGCCCGT GTTTATCCGC CAAAGTCATG GCGCTTTTGA CTTACAGAAA
ATCGGCGAAT TAACTGGTAT TTTAGCCAAT GACTTAACTG ATGGGCAGGA CAATATATGG
CAACTATAA
 
Protein sequence
MLPLDATNPL LSEIKASIDN IIHTNNQTIR TLGLTDALRH DILKALITYS EKVPHPASGA 
TNVNGAISST LIRWQILAYV AGVDLTIAKW FESHLDALSI LHEVGYDKAD QGLWAVWAAE
GHSNPIHYQQ GKISGTKEWC SGANIVDRAL MTYRDKNGQS QLLIVDMQQT GIEIDNEEWQ
AVGMQATDTA TLQFFKVTAS QVGIANAYLE RVGFWHGAAG VAACWYGATA YLADYLISAY
EQKPNDYKAM YLGQISTALA VTQQYFRYVA DLIDSQPQLS HELAIRQLKL QVEKVARQVM
EVVGQALGAA PFCRNAHFAR LSADLPVFIR QSHGAFDLQK IGELTGILAN DLTDGQDNIW
QL