Gene Pcryo_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1796 
Symbol 
ID4034798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2220788 
End bp2221219 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content43% 
IMG OID637974265 
ProductAsnC family transcriptional regulator 
Protein accessionYP_581057 
Protein GI93006620 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.029477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTATT ACACTTATGA CTCTTTAGAT AGCGAACTGA TATCTGAGCT GCGACAAGAT 
GGTCGAGCAA CCATCTCAAA CCTTGCTAAA AAACTCAAAG TTTCTCGTGC CACTGTCCAA
AACAGATTGG ATAGACTGAT TCATAACGGC GCTATTTTAG GATTCACGAT TCGAGTGCAT
GAAGCACTAG ATAAAGAAAC CGTCAAAGCG ATGATGATGA TTGAAGTGAC AGGAAAGTCT
ACGTCACAAG TGATTAGGAA ACTGCGGGGT ATCCCGCAAC TGATTAAGCT ACATACAACC
AATGGGGCGT GGGACTTGGT CGCAGAGATA CACACTACAA GCTTGAGAGA ATTTGATGAA
GTGCTGCGTC AAGTAAGAGA AATTGACGGC ATTCTGAATA GCGAAACCAG TGTTCTGCTT
TCGAGTTTGT AA
 
Protein sequence
MAYYTYDSLD SELISELRQD GRATISNLAK KLKVSRATVQ NRLDRLIHNG AILGFTIRVH 
EALDKETVKA MMMIEVTGKS TSQVIRKLRG IPQLIKLHTT NGAWDLVAEI HTTSLREFDE
VLRQVREIDG ILNSETSVLL SSL