| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1710 |
|---|
| Symbol | |
|---|
| ID | 4034590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2117367 |
|---|
| End bp | 2118575 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637974175 |
|---|
| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| Protein accession | YP_580971 |
|---|
| Protein GI | 93006534 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATGA CCCAACGTAT CGCCGTATTA GGCGCGACAG GCTCGATTGG CGACAGTACG
TTAGCCATCT TGGCGGCACA ACCACAGCAT TACGATGTTT ATGCCTTATC TGGATATCAC
CGTTTAGATA AGCTGCTTGC GCTTTGTCAG CAGTTTGCTC CTAAGCGGGT AGGCGTACCG
ACAGCTGCGG TTGATGAGTT TGCCAAGCGT CTTAGCGAGG CAGGACTTGA TATCGAAGTA
GTCGGTGGCG AAACAGGCCT CGTAGATATC GCTACCGATT CACAAACTGA TACTGTCGTT
GCTGCTATTG TTGGCGCCGC AGGCTTGCCT TCTACTCTAG CTGCTGCCCG TGCAGGCAAG
CGTATCTTAC TAGCGAACAA AGAAGCGCTG GTGATGGCAG GGCAAGTGAT GATCAATGCG
GTCAAAACGC ATCATGCAAC TTTGCTGCCG CTTGATTCTG AACATAACGC TATCTTTCAG
TGTTTACCAT TTGCCATTCA GCAGGATAAT ACCCAAATTC ACCGACTAAA TCATGGCGTG
CGTAAGCTAT GGCTAACCGC TTCTGGTGGA CCGTTCTTAC AGCAGTCATT TACGCAGATG
CAGCAAGCTA GTGTCGCTGA AGCGGTCAAA CACCCAAACT GGTCGATGGG ACAAAAGATA
TCTGTCGATT CTGCCACGAT GATGAACAAG GGGCTTGAGC TGATTGAAGC CTGTCATTTA
TTTGATTTGC CTGAAAATAA GATAAATGTG GTGATTCATC CACAAAGTAT CATTCACTCA
ATGGTAGAAT ATAGCGACGG CAGCTTTTTG GCGCAGCTTG GCAGCCCAGA TATGAAAACG
CCCATCGCTC ATGCGCTAAG CTACCCTGAC CGTATTGACA GTGGCTCGCA GCCATTAGAC
TTATTTGCAT TAAGTGGTTT AGAGTTTATC GAGCCTGATT TGCAAAAATT TGCCTGCTTA
CGTCTGGCAC GAGAGGCGAT GCAAACGGGT ACTCACGCGA CCATCATTCT AAATGCGGCG
AATGAGATTG CAGTATCGGC ATTTTTGAAT AATCAAATTC GTCTGACGGA TATTGCTGAT
ATTAATGAGC AAGCATTGAA TGAGATACAA GTGTCGGCAT TAACTGAGAC GGCTGATATT
GATGAGATTT TAGCAATCGA TAACCTAGCG CGTCAGCATA CTGAGAAGCT GGTGGCAAGA
TTGGTTTAG
|
|---|
| Protein sequence | MVMTQRIAVL GATGSIGDST LAILAAQPQH YDVYALSGYH RLDKLLALCQ QFAPKRVGVP
TAAVDEFAKR LSEAGLDIEV VGGETGLVDI ATDSQTDTVV AAIVGAAGLP STLAAARAGK
RILLANKEAL VMAGQVMINA VKTHHATLLP LDSEHNAIFQ CLPFAIQQDN TQIHRLNHGV
RKLWLTASGG PFLQQSFTQM QQASVAEAVK HPNWSMGQKI SVDSATMMNK GLELIEACHL
FDLPENKINV VIHPQSIIHS MVEYSDGSFL AQLGSPDMKT PIAHALSYPD RIDSGSQPLD
LFALSGLEFI EPDLQKFACL RLAREAMQTG THATIILNAA NEIAVSAFLN NQIRLTDIAD
INEQALNEIQ VSALTETADI DEILAIDNLA RQHTEKLVAR LV
|
|---|
| |