Gene Pcryo_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1620 
Symbol 
ID4035770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1992052 
End bp1993176 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content46% 
IMG OID637974085 
Producthypothetical protein 
Protein accessionYP_580881 
Protein GI93006444 
COG category[L] Replication, recombination and repair 
COG ID[COG5377] Phage-related protein, predicted endonuclease 
TIGRFAM ID[TIGR03033] putative phage-type endonuclease 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.56685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.026153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA TCGCATTAAA CACGACGACT CAGCCAAGAC ACACCAAGCG CACTACTGTT 
AAGATTAAGA CGCCAATAAA GACTAAGCAT GGTATCGAAG ATATGCCGAA GTCCAAGCTA
GAGAGCAAAC CCGTTAAGCC GTCTGCTCAT CAATCAACCA CTGCTAAACG TTTGGTCAAT
ACCAAATCTT TGAGCCATGA GGACTGGCTA CAAGTACGCA GACAAGGTAT TGGCAGCTCT
GATGCTGCTG CCGCTTGTGG TATCCATCCT TATTTGTCTA TGCTGGAGCT ATGGATGATT
AAGACCGGTC GTATCGACTC TGATATCGAT GAGAGCATCG AAGGGTACTC GCCATTGTAT
TGGGGCAATA CCTTAGAGCC GATGGTCGCT AAATACTATC AAGAGCATAC CGGCAATAAG
GTGCGCCGCG TCAATGCCAT CTTGCAGCAT CCTGAGCAGC CATTTATGCT GGCGAACTTA
GACTATGCAA TCACTGGTAA TGACGAGGTA CAGATACTGG AATGTAAAAC TGCTGGTGAA
CATGGTGCCA AGCTATGGAA GCATGGCGTA CCGCTCTATG TCACTTGCCA AGTACAACAT
CAACTGGCGG TCACGGGTAA AGCTGCGGCG CATATTTGCG TTCTGCTTTG TGGACACGAA
GCGAAGATTT ATAAAGTTGA GCGTGATGAA TACTTGATTG CATCCATCAT GGAGCATGAG
CATCTGTTCT GGCAATACGT AGCAACGGAC ACGCCTCCAA CTCCTGATCA TTCGGAATCC
GCAGCAAGAG CATTAAAACA GCTTTATCCA ACCCCTGAGC CCTCAAGCAA AGTTGATCTA
ACGGATGATG ACGGTGCTAA TAAACTGTTT GAGCAATTGC TTAGCTACCG TGACTATATG
CAAGAGTTAG AGCAGCGTCA TGACCAAGTG AAGCATCAAC TGCAAAGCTT AATTCAAGAC
AATGAGATTG CGGTATTTAA GAAAGGCGCT ATCTCTTGGA AGCGCTCTAA AGACAGTGTC
AGTCTTGATA GTAAAGCACT AACCAAAGCG CATCCTGAGT TGCTCGAGCA GTTTAGTAAA
ACCCGTCAAG GCAGTCGTCG CTTTGTCATC CTTAACGATA ACTGA
 
Protein sequence
MNMIALNTTT QPRHTKRTTV KIKTPIKTKH GIEDMPKSKL ESKPVKPSAH QSTTAKRLVN 
TKSLSHEDWL QVRRQGIGSS DAAAACGIHP YLSMLELWMI KTGRIDSDID ESIEGYSPLY
WGNTLEPMVA KYYQEHTGNK VRRVNAILQH PEQPFMLANL DYAITGNDEV QILECKTAGE
HGAKLWKHGV PLYVTCQVQH QLAVTGKAAA HICVLLCGHE AKIYKVERDE YLIASIMEHE
HLFWQYVATD TPPTPDHSES AARALKQLYP TPEPSSKVDL TDDDGANKLF EQLLSYRDYM
QELEQRHDQV KHQLQSLIQD NEIAVFKKGA ISWKRSKDSV SLDSKALTKA HPELLEQFSK
TRQGSRRFVI LNDN