Gene Pcryo_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1561 
Symbol 
ID4034413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1915336 
End bp1915983 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID637974024 
Productmaleylacetoacetate isomerase 
Protein accessionYP_580822 
Protein GI93006385 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAC TTTATGGCTA CTTTCGCAGT AGTACCTCTT ACCGTACACG TATCGCAATG 
AATTTAAAGC AGTTAGATTA CGATTACATT GCGGTTAATT TAGCAAAAGA TGAACAATTA
GAAGCCGTCT TTCAATCTAT TAATCCTCAA GGCTTGGTAC CCGTCGTACA AATAAATGAT
TTATGGTTGT ATCAAAGTCC TGCTATTTTG GAGTGGTTAG AAGAGGTCTA TCCTGAGCAT
CCTCTATTGC CCAAAGACGC AGCAGGTCGC ATGCAAGTAC GGGCTTTGAG CGCTATGATT
GGCTGTGATA TCCATCCGCT AAATAACCGA CGTATTTTGC AGTATCTGCG TAATGAGCTG
TCAGTAGATG AGGATCAAGT CATGGCTTGG TGCCATCGCT GGATGAGTGA AGGTTTTGAC
GCTCTCGAAA AACGCTTGGC ACAAGACAAA ACACGCGGTA AATTCTGCTA TGGCGACAGC
CCTACTTTTG CAGATTGTTA TCTGATTCCG CAGGTCTCTT CTGCCGAACG CTTCAAGGTA
GATCTCAGTG CTTATCCAAA TATCGTTGCG ATCGACGCCC ACTGTCGAAC ATTAAAGGCT
TTTGCCGACG CTGACCCTAT GGTGCAGCCT GATGCACCAA ATGCTTGA
 
Protein sequence
MMTLYGYFRS STSYRTRIAM NLKQLDYDYI AVNLAKDEQL EAVFQSINPQ GLVPVVQIND 
LWLYQSPAIL EWLEEVYPEH PLLPKDAAGR MQVRALSAMI GCDIHPLNNR RILQYLRNEL
SVDEDQVMAW CHRWMSEGFD ALEKRLAQDK TRGKFCYGDS PTFADCYLIP QVSSAERFKV
DLSAYPNIVA IDAHCRTLKA FADADPMVQP DAPNA