| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1544 |
|---|
| Symbol | |
|---|
| ID | 4034475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1897517 |
|---|
| End bp | 1898227 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637974009 |
|---|
| Product | Pirin-like |
|---|
| Protein accession | YP_580807 |
|---|
| Protein GI | 93006370 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.10868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.29614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA TCTATCATGC AGCAGATTCT CGTGGCGATG CCAACCATGG CTGGCTCAAA
AGCAAGCACA CCTTTAGCTT TGCCAATTAT CACAATCCAG AACGTATGGG CTTTGGCGCG
CTACGTGTCA TCAATGATGA CTTCGTCATT GGTGGTCAAG GCTTTGGTAA GCACTCACAC
CGCGATATGG AAATTATCAG TATTCCTCTA TCCGGTAAGC TCGGTCACGG CGATAACATC
GGTAATAATG GCATCATCGA AACCGGTGAA ATCCAAGTCA TGTCAGCGGG TACTGGTATC
ACGCACAGCG AAATGAATGG CGATGACAAA GAAGAGGTGA AGTTCCTACA GATTTGGGTT
ATTCCAAATA AAATGAACGT TGAGCCTCGT TATCAGCAAG TTCGTATGGA CGATATCCTA
AAGCCAAATG AGTTCAATCA AGTATTGTCA CCCAATGCTG ACGATGCAGG CGTATGGATT
CATCAAGATG CTTGGTTTAG CATGGGTGAT TTCGATAAAG GTGTTACCCA TACCTATCAG
CTAAAAGATC CTAACAATGG TGTTTATGTC TTTGTCATTA GCGGTAAAGT TGTCGTAAAC
GGTAACACTT TGGATACACG CGATGGCCTT GGTGTTTGGG ATACTAAGAA CTTTACGATG
GACGTCATCG ATGATGCTAA AGTATTGCTA ATGGAAGTAC CAATGAGCTA A
|
|---|
| Protein sequence | MKTIYHAADS RGDANHGWLK SKHTFSFANY HNPERMGFGA LRVINDDFVI GGQGFGKHSH
RDMEIISIPL SGKLGHGDNI GNNGIIETGE IQVMSAGTGI THSEMNGDDK EEVKFLQIWV
IPNKMNVEPR YQQVRMDDIL KPNEFNQVLS PNADDAGVWI HQDAWFSMGD FDKGVTHTYQ
LKDPNNGVYV FVISGKVVVN GNTLDTRDGL GVWDTKNFTM DVIDDAKVLL MEVPMS
|
|---|
| |