| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1518 |
|---|
| Symbol | prpE |
|---|
| ID | 4034623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1866163 |
|---|
| End bp | 1868208 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637973982 |
|---|
| Product | propionyl-CoA synthetase |
|---|
| Protein accession | YP_580781 |
|---|
| Protein GI | 93006344 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02316] propionate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.361962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC AAACCGCCAC TGCAGTGACC AATCAAATGT CAGCCCCAAC ATTTCAAGCA
CTAAATACGA CTCAAACCTT TGCTGAGATT TATCAGTCTT CTATTGAAAA TAAAGAAGAG
TTTTGGGCTG AGCAAGCCAA GCGTATCTAT TGGCATAAAG AGCCTGAGCA AATCCTTGAT
GACAGTAATT TGCCATTTGC GCAGTGGTTT GTTGGCGGCG AGACCAATCT TTGCTATAAC
TGTGTCGATC GTCACCTTGA AGAACGTGCA GAACAGGATG CCTTTATTTG GCTGTCATCA
GAGATTAATC AAGAACTCGT AGAAACCTAT CCTGCTGTAG TCGATGCTTT TAAAGACTTG
GGTAATAACG TTGAGTTCTA TACCGACTAC ACCAAGCGCC GCCTGACTTA TAACGACCTT
TATAAAGAAG TGAATTATTT TGCCGATGTA TTAAAGCGTT ACGGTATTGA GAAGGGCGAT
CGTGTCATCA TTTATATGCC GATGATTTTA GAGGCCGCTT ATGCAATGCT CGCCTGTGCG
CGTATCGGTG CAGTGCATTC GGTGGTATTT GGTGGCTTTG CTGCCCATAA TTTAGCCATT
CGTATGGATG ATGCTGAAGC AAAAATGGTC ATCACAGTGG ATGCAGGTTT GCGTGGTGGT
AAAGTCGTCA ACTATAAAAA CCTTGTCAAT CAAGGTATCG AGCAGGCAAC CACTAAGCCT
GAGCATGTAG TAGTGGTCAA TCGTGGTATT TTGCCGTTTG ACGTAAAAGA GCTAGATGTG
GATTATGCCA CTGAACGCCG TATCAGCTGT GAAGCCAATG CTATCGTCGA GCCTGTATGG
CTTGAGTCTA ATACGCCATC GTATCTGCTT TATACCTCTG GTACGACGGG CACACCAAAA
GGTGTGCAAC GTGATACCGG TGGTCATGCA GTAGCACTGA CCACATCGAT AGACTATATC
TACGACGGTA AGGCAGGCGA GACGTTTTGG GCGATATCTG ATATCGGTTG GGCCGTTGGG
CATTCTTATA CCATTTATGC GCCATTGCTT GCTGGCATGA CCAGTGTTAT GTATGAAGGC
TTACCGCATC TACCAAACCC TGGTATCTGG TGGCGTATTG TGGAGGCCAA CAAGGTCAAT
ATCTTATTCA CCGCACCAAC TGGTGTGCGT ATGCTGAAAA AGCAAGATGA GACATGGATG
ACCCGTTACG ATGTCTCAAG CGTCAAATCC TTCTTTTTGG CAGGTGAGCC ACTAGATGAG
TCTACTGCCA GCTGGCTGAC CAAGCATTTG GGTGTACCGA TTTTAGACCA TTATTGGCAG
ACAGAATCAG GTTGGCCTAT TCTGAGTAAT ACTCCTAGGT TCGCTGATAA ACCGCACAAA
CAAGGCTCAC CTGGCTATCC TATGTATGGC TACGATGCGC AGGTCATCAA TGAAGAAACT
GGCGAGCCGT GTAAAGCGGG TGAAAAAGGT TTACTGGCGA TTCGTGCGCC CTTACCACCG
GGTTGTTTGA CCACAGTTTG GGGTAATGAT AAGCGCTTTA TTGACAGCTA CTTTAGCTTA
GCGGATAGCA ATCAATATTC GACATCGGAC TATGCAGTCG TTGACGAGGA CGGTTATTTT
CATATCCTTG GTCGTACCGA TGATGTCATC AACGTCGCCG GTCATAGACT GGGAACCCAA
GAGATTGAAG AGGCAATCAG TATGCATGCA GAGGTCGCAG AGTGTGCGGT CGTGGGTATT
CAAGATGAAC TAAAAGGCGA GCTGCCGATT GCTTTTTGCG TGTTAAAAGA TCATGAACTG
GTGGCAACCA CTGAAAACCG CTTTCGCCTT GAGCAGCAAG TGATCGGTGC GGTGGTGAAA
TCCTTAGGCG GTATCGCGCG ACCTGCTGCG ATTTATTTCC CGCAAGCATT ACCAAAGACG
CGCTCTGGTA AGATATTGCG CCGTGCTATT CGGGCGTTAG CAGAGGATAA ACCCACTGGT
GATATGTCTA CCCTTGATAA TCCAACGGCT ATTGATGCGG TCAAGCAATC TATGAAGGAT
TACTAG
|
|---|
| Protein sequence | MSAQTATAVT NQMSAPTFQA LNTTQTFAEI YQSSIENKEE FWAEQAKRIY WHKEPEQILD
DSNLPFAQWF VGGETNLCYN CVDRHLEERA EQDAFIWLSS EINQELVETY PAVVDAFKDL
GNNVEFYTDY TKRRLTYNDL YKEVNYFADV LKRYGIEKGD RVIIYMPMIL EAAYAMLACA
RIGAVHSVVF GGFAAHNLAI RMDDAEAKMV ITVDAGLRGG KVVNYKNLVN QGIEQATTKP
EHVVVVNRGI LPFDVKELDV DYATERRISC EANAIVEPVW LESNTPSYLL YTSGTTGTPK
GVQRDTGGHA VALTTSIDYI YDGKAGETFW AISDIGWAVG HSYTIYAPLL AGMTSVMYEG
LPHLPNPGIW WRIVEANKVN ILFTAPTGVR MLKKQDETWM TRYDVSSVKS FFLAGEPLDE
STASWLTKHL GVPILDHYWQ TESGWPILSN TPRFADKPHK QGSPGYPMYG YDAQVINEET
GEPCKAGEKG LLAIRAPLPP GCLTTVWGND KRFIDSYFSL ADSNQYSTSD YAVVDEDGYF
HILGRTDDVI NVAGHRLGTQ EIEEAISMHA EVAECAVVGI QDELKGELPI AFCVLKDHEL
VATTENRFRL EQQVIGAVVK SLGGIARPAA IYFPQALPKT RSGKILRRAI RALAEDKPTG
DMSTLDNPTA IDAVKQSMKD Y
|
|---|
| |