Gene Pcryo_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1493 
Symbol 
ID4034461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1836200 
End bp1836751 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID637973957 
Producthost factor Hfq 
Protein accessionYP_580756 
Protein GI93006319 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG GACAAACTTT ACAAGATCCG TTCTTGAACT CACTACGCAA AGATCGCATT 
CCTGTTTCTA TTTTTTTAGT CAATGGTATT AAGCTGCAAG GTCAAATAGA ATCATTCGAT
CAGTATGTGG TTTTGCTGAA AAATACCGTC AGTCAGATGG TATATAAGCA TGCTATCTCA
ACAGTCGTCC CAGCACGTAA TCCTCGTAGC AGTACAACGC CAAGCGCGAC TACTCAAAGC
CAAGGCGCAG CACCGATGGG CTATCCGAGT CAAAGTGGCG GTGTGAGCGG TGGTTTTGAG
CGTGGCGGTA GCGCAAATCC AGCTACTGGC GGCGGCTTTG AAGAACGTGG TTTTGCCAAT
CGTAGTGGCT TTAATCGTGG TGGCTTTAGT CAAGGCCAAG AGCGCGGCTT TGAGCGCGGT
AGCTTTGGTC AAGGTCAAGA GCGCGGCTTT GAGCGTGGTG GTTTTGGTCA AGATCGTGGT
TTTGAAGCGC CGTTAGAGAA TGTGGGTTAT GACAACAAAC CTAATGACGA GTCTGATGAT
AGTAACTCTT AG
 
Protein sequence
MSKGQTLQDP FLNSLRKDRI PVSIFLVNGI KLQGQIESFD QYVVLLKNTV SQMVYKHAIS 
TVVPARNPRS STTPSATTQS QGAAPMGYPS QSGGVSGGFE RGGSANPATG GGFEERGFAN
RSGFNRGGFS QGQERGFERG SFGQGQERGF ERGGFGQDRG FEAPLENVGY DNKPNDESDD
SNS