Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1493 |
Symbol | |
ID | 4034461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1836200 |
End bp | 1836751 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637973957 |
Product | host factor Hfq |
Protein accession | YP_580756 |
Protein GI | 93006319 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAG GACAAACTTT ACAAGATCCG TTCTTGAACT CACTACGCAA AGATCGCATT CCTGTTTCTA TTTTTTTAGT CAATGGTATT AAGCTGCAAG GTCAAATAGA ATCATTCGAT CAGTATGTGG TTTTGCTGAA AAATACCGTC AGTCAGATGG TATATAAGCA TGCTATCTCA ACAGTCGTCC CAGCACGTAA TCCTCGTAGC AGTACAACGC CAAGCGCGAC TACTCAAAGC CAAGGCGCAG CACCGATGGG CTATCCGAGT CAAAGTGGCG GTGTGAGCGG TGGTTTTGAG CGTGGCGGTA GCGCAAATCC AGCTACTGGC GGCGGCTTTG AAGAACGTGG TTTTGCCAAT CGTAGTGGCT TTAATCGTGG TGGCTTTAGT CAAGGCCAAG AGCGCGGCTT TGAGCGCGGT AGCTTTGGTC AAGGTCAAGA GCGCGGCTTT GAGCGTGGTG GTTTTGGTCA AGATCGTGGT TTTGAAGCGC CGTTAGAGAA TGTGGGTTAT GACAACAAAC CTAATGACGA GTCTGATGAT AGTAACTCTT AG
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Protein sequence | MSKGQTLQDP FLNSLRKDRI PVSIFLVNGI KLQGQIESFD QYVVLLKNTV SQMVYKHAIS TVVPARNPRS STTPSATTQS QGAAPMGYPS QSGGVSGGFE RGGSANPATG GGFEERGFAN RSGFNRGGFS QGQERGFERG SFGQGQERGF ERGGFGQDRG FEAPLENVGY DNKPNDESDD SNS
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