Gene Pcryo_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1430 
Symbol 
ID4035209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1758121 
End bp1759203 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content47% 
IMG OID637973894 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_580693 
Protein GI93006256 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.318387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGTC ATCCATTACC TTCAACGCAC TCAAGCGCAT CTGCTATTGC TATAGAAAAA 
AAACGTCGCC TAAATCCTAT CTGGCAGGCA AGACTTAATC GCTTTCGTCA AAATCGTCTT
GGTGTCATAT CGCTGTTCAT TTTTGCCTTG ATATTTGTGA TCTGTATGGC AGCCAATGTG
ATTGCCAATG ACAAGCCGCT ACTTGTACAG TATCAAGGCG ATTACTACTT CCCCGTACTA
AAAGCCTATC CTGAGACGAC TTTTGGCGGA GTGTTTGAGA CCGAGACCAA TTACAAAGAT
CCTGCGGTAC AGACGCTGAT TACTGAGCAG GGTTATTATG TGATGCCGAT CATTCCGTTT
GCTGATCAGA CGCCAAACGT TGAGCTAGGT ATTCCATATC CAGCGGCACC CAATAGCCAG
AATTGGCTTG GTACGGATGA CTTGGGTCGC GATGTGCTGG CGCGTATACT GTATGGCATG
CGAGTGTCAT TATTATTTGG TCTGGCATTG ACACTTGCCG GTGCATTAAT TGGTATTATC
GTCGGTGCGA TACAAGGTTA TTACGGTGGT TGGATAGATT TGGCTGGTCA GCGCTTCATG
GAGGTTTGGG GCGGTATGCC GCAGCTGTTT ATGATTATTA TTTTGGTCAG CTTATTTAGC
CCTAGTATTT TTATGCTATT TGCGATGATG TTATTGTTTG GCTGGATGGG ATTGGTTGGT
TTGGTACGGG CAGAGTTTTT GCGCGCGCGT AACTTTGATT ATGTGCGTGC GGCGCGCAAT
CTGGGGGCTT CCGACAGCCA AATCATGCTA AGGCACATCT TGCCCAATGC CCTAGCATCA
AGCTTGTCAC AGCTGCCGTT CATTTTAACG GCCAATATTA TTGCGTTAAC AGCGCTAGAT
TTCTTAGGTT ATGGTTTACC GCCTGGGTCA CCGTCGCTGG GTGAGCTGAT GGTACAAGGG
AAAAACAACC TTGATGCGCC TTGGCTGGCC TTATCGGGAT TTTTTAGTTT AACCTTTATT
TTGTCGTTGC TCATCTTCGT TGGCGAAGCA CTGCGTGATG CCTTTGATCC GAGGCGCTCT
TAA
 
Protein sequence
MSSHPLPSTH SSASAIAIEK KRRLNPIWQA RLNRFRQNRL GVISLFIFAL IFVICMAANV 
IANDKPLLVQ YQGDYYFPVL KAYPETTFGG VFETETNYKD PAVQTLITEQ GYYVMPIIPF
ADQTPNVELG IPYPAAPNSQ NWLGTDDLGR DVLARILYGM RVSLLFGLAL TLAGALIGII
VGAIQGYYGG WIDLAGQRFM EVWGGMPQLF MIIILVSLFS PSIFMLFAMM LLFGWMGLVG
LVRAEFLRAR NFDYVRAARN LGASDSQIML RHILPNALAS SLSQLPFILT ANIIALTALD
FLGYGLPPGS PSLGELMVQG KNNLDAPWLA LSGFFSLTFI LSLLIFVGEA LRDAFDPRRS