| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1302 |
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| Symbol | prpD |
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| ID | 4034502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 1590050 |
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| End bp | 1591552 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637973768 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_580567 |
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| Protein GI | 93006130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTG TGGAAAGCAA TGTACGACCG GAGTATGATA GCGAGATTGA AAAAATCGCC
GATTATGTAC TCAATTACTC TATAGATAAC GACTCACCCA ATAGCGCTGA TGCTTGGAAT
ACTGCTCGCT ACTGCCTGAT GGATACGCTT GGCTGCGGAC TACTGGCATT ACGTTTCCCT
GAATGTACCA AGCATTTAGG TCCTGATTGC GCCGATCAAA TTACTCCTAA TGGCGCGCGT
GTCCCCGGCA CCTCCTATCG ACTAGACCCT ATTAAAGCTG CCTTTGACAT TGGCTGTATC
GTGCGCTGGC TTGATTACAA TGATACATGG CTCGCTGCCG AATGGGGTCA CCCCTCTGAC
AATTTAGGGG CGATTTTGGC AGTGGCGGAT TATATCAGCC AGCAAAACGT CAGTCAGGGG
CATGCACCTC TTATTATGAA AGACGTACTA GAAGCTATGA TTATGGCACA TGAGATTCAA
GGGGTGTTGG CATTAGACAA CTCCTTTAAT CGTGTGGGTC TTGATCATGT ATTTTTAGTG
AAGTTGGCAT CGACCGCTGT CGTTGCCAAA CTTTATAAAC TGCCACATGA GCGTATCATG
GCTGCCATCT CTCAAGCTAT CGTCGATGGT CAAGCGCTAC GTACCTATCG TCATGCACCC
AATGCTGGTA GTCGCAAATC ATGGGCTGCA GGGGATGCGA CCAGTCGAGC CGTACGTTTG
GTCGATATCA CGCGCCGCGG CGAGATGGGC ATTCCATCTG CATTGACAGC GCCGCAATGG
GGCTTTTATG ATGTGCTGTT TAGCCATACT AATAAGGATT TGGCGCTTAA GCCTGAAAAC
GAGCGGTGCT TTACCTTCCA GCGCGAGTTT GGCAGCTATG TGATGGAGAA TATCTTATTT
AAGATAAGCT TCCCTGCCGA GTTCCATGCG CAAACGGCTT GTGAGGCGGC CGTTATCTTG
CATCCACGTA TTGATGACCG CATGGAAGAC ATTGAAAAAA TCATCCTAAC GACTCATGAG
TCTGCTATTC GGATCATCTC AAAGGAAGGG ACGCTGGCCA ATCCTGCAGA TCGCGATCAT
TGTTTGCAAT ATATGGTCGC AGTGGCTTTA CTCACCGGTG ATTTGATGGC TGAAAACTAT
GAAGATGATT ATCATGCCGA GCATCATATT TTGATTGATG GTCTGCGTCA TAAGATGGTC
GTTGAAGAAG ATGCCGGTTA TTCAAAAGAC TATCATGATC CAAGCAAGCG CTCGATTGCC
AATGCGATAC AGGTATTCTT TAAAGATGGC AGTAGTACCG ATAAGGTAGC GATTGAATAC
CCTATCGGTC ATAAACGCCG CCGTACTGAG GGTTTGCCGA TATTGGAGGC AAAGTTCCGT
GCCAGTCTTG CCACGCGGTT TATCGACAGT CGCTGTACAG AGATTTTTGC ATTGTGTAGC
GACCAACAGC GGTTAGAGCA AACACCAGTA AACGAATTTA TGGATTTATT TGTCGCCTAT
TGA
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| Protein sequence | MSTVESNVRP EYDSEIEKIA DYVLNYSIDN DSPNSADAWN TARYCLMDTL GCGLLALRFP
ECTKHLGPDC ADQITPNGAR VPGTSYRLDP IKAAFDIGCI VRWLDYNDTW LAAEWGHPSD
NLGAILAVAD YISQQNVSQG HAPLIMKDVL EAMIMAHEIQ GVLALDNSFN RVGLDHVFLV
KLASTAVVAK LYKLPHERIM AAISQAIVDG QALRTYRHAP NAGSRKSWAA GDATSRAVRL
VDITRRGEMG IPSALTAPQW GFYDVLFSHT NKDLALKPEN ERCFTFQREF GSYVMENILF
KISFPAEFHA QTACEAAVIL HPRIDDRMED IEKIILTTHE SAIRIISKEG TLANPADRDH
CLQYMVAVAL LTGDLMAENY EDDYHAEHHI LIDGLRHKMV VEEDAGYSKD YHDPSKRSIA
NAIQVFFKDG SSTDKVAIEY PIGHKRRRTE GLPILEAKFR ASLATRFIDS RCTEIFALCS
DQQRLEQTPV NEFMDLFVAY
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