Gene Pcryo_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1295 
Symbol 
ID4034495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1580679 
End bp1582358 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content44% 
IMG OID637973761 
Productcarbon starvation protein CstA 
Protein accessionYP_580560 
Protein GI93006123 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTG CAATCGTGCT ATTGTTTGCT GTTGCCGCTA TGCTTTGCGG TTATCTGTTT 
TACTCAAAAT TTATCGCCAC TAAAATCTTG GCATTGGATA ATAGTATCCC CACGCCAGCA
CATACTATGA AGGATGGGGT AGATTATATT CCCACTAATA AATATGTGTT GTGGGGACAC
CATTTTACTT CAGTCGCAGG GGCAGCACCG ATTATTGGTC CTGCCATTGC GGTTATTTGG
GGCTGGGTAC CTGCTATCAT TTGGGTGGTA TTAGGTACTA TTTTTATGGC AGGTGTCCAC
GACATGTCTG CCATTTGGGC AAGTATGCGC AATCGAGGTC AATCGATTGG CTCGATTGCC
GGTACGGTCA TGGGTACACG TGTGCGCAGC TTGATGATGA TCGTCATCTT TTTATTATTA
CTAATGGTAA ATGCGGTATT CGGCGTCGCT ATTGCTAATA TGATGATAAA AACCCCATCC
GCTGTACTGC CAGTTTGGGG TGCTTTGATA GTCGCCTTTA TCATCGGTCA ATGCATTTAT
CGCTATAAGA TGAATCTGGT TTGGGTATCA ATCATTGGGG TCACGGCTTT ATATGGGCTT
ATCTATCTTG GTCCTATGTT CCCCATTGTG TTACCTGAGA CATTTTTAGG CTTACCTGAC
AATGCTGTTT GGATTATTAT TTTATTTGTC TATGCGGCAA TCGCGTCTTT GTTACCAGTC
TGGATGCTGT TGCAGCCGCG CGATTACATC AATGGCTTGC AGTTATTTGT CGGTCTGATT
TTATTATATG CCGCTATCTT TATTGCGACT CCTAATATTG TCGCGCCAGC GATCAACACA
GCATTGCCAA TCGGTACGCC ATCTATGCTG CCTTTATTGT TTGTGACCAT TGCTTGTGGT
GCAATCTCAG GCTTTCATGG TTTGGTAGCG ACAGGTACGA CGTCTAAGCA AATTGATAAA
GAAGAAGATG TGCGATTCGT TGGTTACTTC GGTGCCATGG GTGAGGGCAT GCTAGCACTC
GGTGCGATAC TTGCGGCAAC AGCAGGCTTT GCAACCCTTG GCGACTGGCA AGCCGTTTAT
CAAAAATTTG GCGACGGCTC TATTGGTGCC TTTATCGATG GCGGTGCGAC TATCTTGAAT
GCAGGTGTTG GCATTGATAT GGTTTTATCG CAGACGATGC TGACGGTAAT GGCAGCATTG
TTCGCTGGTA CCACGATGGA TACTGGAGTA CGTTTGCAAC GCTATATCTT CCAAGAATTT
GGTGAAATTT ATAAACTGCC TGTTCTAAAT AAAAGTGTGG TGGCCACATT GCTTGCCGTT
GGTAGCTGTT TGTTATTAGC ATTCGGTGCT GGTGGCATCG ATGGTGCTGG TGGTATGATT
ATTTGGCCGT TATTTGGCAC GACGAATCAG CTCATGGCAG CATTAACCTT AATGATTGTA
ACCGTTATTT TATTACGTAA AGGCAGACCA GTATGGTATA CCTTAGGGCC ATTGTCGTTC
TTACTGGTCA TGACGGTTTT TGCATTATTG ATTCAGCTAA AAACCTTTTT CAATGACGGT
AATTGGCTGC TTATTATTAT GGATATCATT ATCTTGATAG CCACAATTTT AGTGACGTTT
GAGAGTTTAT CAGTACTCCG TAAAGAATGG TCGATACACA GAGGCAAAAG CAACCTCTAA
 
Protein sequence
MNSAIVLLFA VAAMLCGYLF YSKFIATKIL ALDNSIPTPA HTMKDGVDYI PTNKYVLWGH 
HFTSVAGAAP IIGPAIAVIW GWVPAIIWVV LGTIFMAGVH DMSAIWASMR NRGQSIGSIA
GTVMGTRVRS LMMIVIFLLL LMVNAVFGVA IANMMIKTPS AVLPVWGALI VAFIIGQCIY
RYKMNLVWVS IIGVTALYGL IYLGPMFPIV LPETFLGLPD NAVWIIILFV YAAIASLLPV
WMLLQPRDYI NGLQLFVGLI LLYAAIFIAT PNIVAPAINT ALPIGTPSML PLLFVTIACG
AISGFHGLVA TGTTSKQIDK EEDVRFVGYF GAMGEGMLAL GAILAATAGF ATLGDWQAVY
QKFGDGSIGA FIDGGATILN AGVGIDMVLS QTMLTVMAAL FAGTTMDTGV RLQRYIFQEF
GEIYKLPVLN KSVVATLLAV GSCLLLAFGA GGIDGAGGMI IWPLFGTTNQ LMAALTLMIV
TVILLRKGRP VWYTLGPLSF LLVMTVFALL IQLKTFFNDG NWLLIIMDII ILIATILVTF
ESLSVLRKEW SIHRGKSNL