| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1291 |
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| Symbol | |
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| ID | 4034491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1572196 |
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| End bp | 1576650 |
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| Gene Length | 4455 bp |
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| Protein Length | 1484 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637973757 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_580556 |
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| Protein GI | 93006119 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACT TTACCGACCC AACCAATACT ACTGACTCAT TTACACAATC AGATTTATTT
GATGAATATT CAGATGAGCT GACTTTATCT GCTGTGCCTG AACGTAAAAA TGATGTTATA
CCGGCAGTCG ATGTTGATCT GACGGGTAAA CACCTGATTG AAGCCTCAGC GGGCACGGGT
AAAACTTGGA CGTTGACCGG TATTGTACTG CGCCTACTGA TCGAAGCGCG ACGTGCGCCA
GAGCAAATCA TTGCCACGAC TTTTACTCGA GCTGCCGCTG CCGAAATGCG TCAGCGTATC
CACGATCGTT TGGTAGATTT TTATCAGCTA TTACAATGGG TCAATAGCCT AAGTGCTGAA
CCCAATAACA AGGATGCTTT ATATCCTGAT GTACTACAGG TAATGCCTGA AAGTAATAAG
GATAAACAAG CAGGTAAAGG TTCAAGCGTT GATTCAAATG CTGGGACAGG GATGGATGAG
TTCAATAAAG ACATTGCTGC TGATAGGCAA GCGGCGGCTG AGAAACGTAA ACAAGTAAAA
AAAGATCGTG AAAACTGGCT AGTTAATCAG GCTAAATATG CACGCTTAGA CGCCGTTATG
GACGATCCCA TTAATCTGCA TTTGACTGGG TTTTTACTTG ATCATGTCCA CGGCTATCCA
ATGGCGGAGG CCATTCGACG CACTGCGCTA GTACTAACCA CGTTGGATAA GCTGTTTGTA
GGTACACTCG ACAGTTTGGC GCAAAAGTGG TTGATTGAAT ACAGTAGCGA GACCGGTCAT
CAGCAAGGTA TGGCTATTAT TGAAGACAGC AGTATTGAAC AGGTGACTGA CAGTATTATC
CATGATGAGC TGCGTCAGTT TCAGAGCCGC TTATACTATG AGCAGCCTAA ACTATATGCG
CTAATGGATC AGCAAGGCAA GCTGACTGCA GTTAGCGATC ATAAAAAATA TGTGACTCGT
TCGCTTAAGT TTATTTCAGC GCCGATTGAT GAGATAAAGC TGGAGCAAGG TTTTGACTTT
GGTTTGTATG AGCGACTACT TAATGAGTTT GCTCAGTTAG ATTTAGTAGA TATCCAGCCT
TATTTAAATC CTGATTATAG AAAGTCTCAA GGATTTCGTG GTGGTTCTAA TTTAACCAAA
CAGTTTGATG CCATTATTGA TGTGCATCAA AAGATATTAG AGTATCAGCT GACATTTAAT
AGCTATTTAA ATGAGAGCGA GAATAAGATT TTGACATCAT TGCAAGATGC CAGATATCCA
GATGAAGATG GCAAAATTAA GAACTTTAAT AAGAATAAAG AAAAAGAGCA TCAGACGCTT
TTTGAGCTAG AAACCATTAG TAAGTTAATG GTTCTCTTAG ATATGCTAGA CAGTTTAAAT
CAGCATATAT TGTTGGTATT AGCCAACCTT AATCGCCATA TCGTGCTTGC GGTACGTGAC
AGGCTACCAG TTATCTTAGA GGAGCGCGGT GAGACGACCT TTAGTTTACA AATGGTGCGC
TTAAACCAAG CATTGACTGG CCGCCAAGGA GATAAGCTGG CGCGTTATAT TCGTCATCAT
TATCCTGTGG CATTGATTGA CGAGTCGCAA GATATTAATG GCGAGCAAGC CATTATGATT
GAAAGCATCT ATTTGCCAAA GAATAAACGT AAGCAGTCGG ACAGTGACAA GCAATCAACC
ACTAATAAAA CCAGTCATGA GTTTCTGTTA TTAGTGGGTG ATCCAAAGCA GGCTATTTAC
GGGTTTCGTG GCGGTGATGT GGCCAACTAC AACTATATGA AAGCCCAGTT TGAGAAAAGT
AGCCTTTGGA CGCTCGATAT TAACCGTCGA TCAAATGCTG GTGTGATTGA TGCACTAAAT
TGCTGGTTTG GCATGCCAAC GGAAACGGCT GCTGATAATA AATTAGCACA GCTAGGTAGC
AGTATTTATT ATCAGCATAT CAAAGCTTCT AAACCAGAAA ACCAGCTGTC TTGGTTTAAT
GAGCCAACTA CTCAAAACAG TGCTTTAGTG ACAGAAGTGC TTTCTGCTCA ACCAGTGAGC
TTGTTGCATC TACCTTATGA TAAAGATAAA GAGCTTGAGT ATGATGAGTT TGAAATCACC
GCGCGTCATA TTGCGACCTT GCTCAGTAGT AATCAGACCT TAAAAGGCAA ACCGATTCAG
CCTAGTGATA TCGGTGTGCT GGCACGTACC AAAAAAGACT TAAAACGGGT TGAGGATGAG
CTGGTTAAGC TTAATGTACC GACCTTGACT ACTAGTGATG TCAGTATCTT TGAAACCATC
ATGGCAGAAG ATGTGGCGGC GCTGCTGAGT GCCATGCTAT ACCCATATCG TCATGACATG
ATCAATCGGG TGCTGACTAG CCATCTGTAT GGCCTGAGTA TCAAAGAAGT CAAAGCCATG
ATGACTGACC ATGAGTCAGG AGTGACAGAG GGTAGTTATT TAAGTAGCGC TAGTACGAAA
GCAGTTAATA ATAAAAAAAG CTATCAAGAC TTTATTACCT ACCTAAAACA AGCGGCTCAA
AACTGGCAGC ACTTTGGTGT TTTGTCAGCA TTACATTACT TATTAGATAA AAACCCTGTG
CAGCCGCAAG GCGTTTGGCA AGCTCTGGCA ACTCATCCAG AAGGCGATCG TCACATTATG
GATTTGCGTC ATATGATGGA TGTCTTGGCG CAGTATGGTA TCGGCATGGG TGAGCACGAA
CTATTGGCGT GGTTTAGACA AAATATAGAT GCTGCTCCTA GCAGTGATTG GGCTAAGCAA
TACCCGCTAC CGACAGAGTC TGGCGTGCAG CTTATGACCA TCCACAAGTC CAAAGGGCTT
GAGTTTCCCA TTGTCTATGT ATTGGGTATG GGCGATGCTA GTCGGAAGGC GGGCAATAAT
GAAAAGTTTG GGCTGTATCT ATACAACGCC CAGCAAGCTC CGTCGATTTT AATGCAGCAA
TCGGCAGAGA GTCAATCAAC AGGCAACCAG CGCCGCTTCT CACCCGTAAG AGGCTCTGCC
ACCACAGAAG ATTGTTATAC CGAAATCGAG ACGAAAGAAG GCTTTGATGA GCTGCGACGG
CTTGGCTATG TGGCATTTAC GCGTGCCAGC GAGCAGCTTT ATGTGGTGTT GCGAGATCCT
AATAACAAAA CAGGATTTGA GCTAAAGCCA GCGTTCTATT GGTTGGAATC ACCAGAGGCA
AAGTTTGATT TGCCTGATAG GCTCAAAGGC ATCGTAGGTA TGCTCAGAGG GCATAATGTC
AATGAGTTCT ATAATAATGA CAGTAATGGT GCTAATGCAT TGGGCTTAGC AGGTAACGCA
ACGCTTGCCA CTGCTAAATC TATAACTGAG ACTATTGAGT ACGCGCCTTT TGCAGAAGTT
ATGAAAACCA ATTATTTTTA TGGTTGGGCC AAGACCAGTT TTACGGCTTT AGCCCGTCAG
CTAGATGAAT CTACGCAGGC GCTGGCTGTG GTAGATGAAC GTATGGATGA TGCCATAGAC
ATTGATATGA CAGAGTCGGT AGTATCGTCC AGTAATAGTG GTTTTTTTAA ACCAGTTAGT
GAGTTGAGCC TCAAATCAGA GGATGATATC CGTTTTACTT TTGTCAAAGG CGCCAATGCC
GGTACGTTTT TGCATGAAAT ATTTGAAAAA ATTGATTTCA ATAATAAATC GCAGTGGTCT
CAGGTGATTG ATAGGGCCGT TAGTAGTTAT CAGCTGCCTT TGGTTTATAG TAGTGCTGAA
CAGCAAAGTC GACTATTACA AGCAAATAAT AGAGAAAATG GTCGTATACC TGACTTAGAT
TCAATGGATG CTACAAAGCA TGAGGCATTA CTTAACTGGT TTGAAGAGGT GCTAAAGGCG
CCGTTATTAG CGTCCAATCA ACCCTTACAG TCTATCAATG CAAGTCAACG GTTTGCTGAA
TTAGAGTTTA ATATGGGGCT GTCAGAGCGC TTTAAGGCGC AAGATATTAA TAGCCTATTT
CAGCAGTATC TCCCGAATGA GGTGGACAAA CACGTCAATC TTGTTCCACA AAACAAAACG
CATTTGTATC GTTATCTGCG GGGTGAAATC GATTTGGTGT ATGAGCATGC TGGCAAGTAT
TACGTTGTCG ATTACAAAAG TAATTTTTTA GGTAATAGCC TAAGCGATTA TGACGTAAGC
ACACTCAAAC AAGCAATGTC AAAGGCAGGA TATTGGTTAC AAGCAGCGAT TTATCAAGTC
GCGTTACATC GTTTCCTTGC AATGAGAATT AGTGATTATG CAGGTAATGA AGATAAGTAT
CTTGGCGCTG TTGAATATGT CTTTTTACGG GGCGTGTATG ATCCAAATTC TCAAATAGCT
GCTGATCTAT TGCAAGATGT CAGAGAAGCT GATAATAGTC ACTCAATGCC CAACGACCGC
TATGGATTAG TCACGTGGGA TATTCCAATT GAGTTCATTA AGGCCCTAGA TGCGTTGTTT
GGCCTGCCAG ATTAG
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| Protein sequence | MTDFTDPTNT TDSFTQSDLF DEYSDELTLS AVPERKNDVI PAVDVDLTGK HLIEASAGTG
KTWTLTGIVL RLLIEARRAP EQIIATTFTR AAAAEMRQRI HDRLVDFYQL LQWVNSLSAE
PNNKDALYPD VLQVMPESNK DKQAGKGSSV DSNAGTGMDE FNKDIAADRQ AAAEKRKQVK
KDRENWLVNQ AKYARLDAVM DDPINLHLTG FLLDHVHGYP MAEAIRRTAL VLTTLDKLFV
GTLDSLAQKW LIEYSSETGH QQGMAIIEDS SIEQVTDSII HDELRQFQSR LYYEQPKLYA
LMDQQGKLTA VSDHKKYVTR SLKFISAPID EIKLEQGFDF GLYERLLNEF AQLDLVDIQP
YLNPDYRKSQ GFRGGSNLTK QFDAIIDVHQ KILEYQLTFN SYLNESENKI LTSLQDARYP
DEDGKIKNFN KNKEKEHQTL FELETISKLM VLLDMLDSLN QHILLVLANL NRHIVLAVRD
RLPVILEERG ETTFSLQMVR LNQALTGRQG DKLARYIRHH YPVALIDESQ DINGEQAIMI
ESIYLPKNKR KQSDSDKQST TNKTSHEFLL LVGDPKQAIY GFRGGDVANY NYMKAQFEKS
SLWTLDINRR SNAGVIDALN CWFGMPTETA ADNKLAQLGS SIYYQHIKAS KPENQLSWFN
EPTTQNSALV TEVLSAQPVS LLHLPYDKDK ELEYDEFEIT ARHIATLLSS NQTLKGKPIQ
PSDIGVLART KKDLKRVEDE LVKLNVPTLT TSDVSIFETI MAEDVAALLS AMLYPYRHDM
INRVLTSHLY GLSIKEVKAM MTDHESGVTE GSYLSSASTK AVNNKKSYQD FITYLKQAAQ
NWQHFGVLSA LHYLLDKNPV QPQGVWQALA THPEGDRHIM DLRHMMDVLA QYGIGMGEHE
LLAWFRQNID AAPSSDWAKQ YPLPTESGVQ LMTIHKSKGL EFPIVYVLGM GDASRKAGNN
EKFGLYLYNA QQAPSILMQQ SAESQSTGNQ RRFSPVRGSA TTEDCYTEIE TKEGFDELRR
LGYVAFTRAS EQLYVVLRDP NNKTGFELKP AFYWLESPEA KFDLPDRLKG IVGMLRGHNV
NEFYNNDSNG ANALGLAGNA TLATAKSITE TIEYAPFAEV MKTNYFYGWA KTSFTALARQ
LDESTQALAV VDERMDDAID IDMTESVVSS SNSGFFKPVS ELSLKSEDDI RFTFVKGANA
GTFLHEIFEK IDFNNKSQWS QVIDRAVSSY QLPLVYSSAE QQSRLLQANN RENGRIPDLD
SMDATKHEAL LNWFEEVLKA PLLASNQPLQ SINASQRFAE LEFNMGLSER FKAQDINSLF
QQYLPNEVDK HVNLVPQNKT HLYRYLRGEI DLVYEHAGKY YVVDYKSNFL GNSLSDYDVS
TLKQAMSKAG YWLQAAIYQV ALHRFLAMRI SDYAGNEDKY LGAVEYVFLR GVYDPNSQIA
ADLLQDVREA DNSHSMPNDR YGLVTWDIPI EFIKALDALF GLPD
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