| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1212 |
|---|
| Symbol | |
|---|
| ID | 4035044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1466868 |
|---|
| End bp | 1467749 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973677 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_580477 |
|---|
| Protein GI | 93006040 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.524919 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACA ATGCACCCTC ATCTTTAGCA ACAGCAGTAT CAAACGTCAG CAATTATTTG
TCTTGTGTTC AAGTAGTGAT GGTCAATACG ACATTGCCTG CCAATATTGG TTCAGCAGCA
CGCGCCATGC ACACCATGGG GTTATCGAGA TTGACGGTGG TTGATCCAAA ATTACCGATT
GATGACACTA GCGTCTCACA TGCTGCTGGT GGCAGTGATT TGCTATCATC AGCAATCATC
GCACCAACGC TTGAGTCTGC TATCGCTGAT TGCCAATTGG TATTTGCGGC CAGTAGTCGT
AGCCGTCATT TGCCGCGTCC TGTGGTCACG CCGACACAAG CTGCCAAAAT CATGTTGGAC
TTTATTGATA AGCAAAGCAC AGTTAATGGG CAAGATGGTA TAAATACAGC GCCCAATATT
GCTATCCTGT TTGGGCGTGA AGATCGCGGC TTGACCAATG AAGAATTGGC TTATGCTGAC
TATCATGTTC AAATTGATGC CAACCCTGCT TATCCAGTGC TCAATGTTGC TTCAGCCGTG
CAAGTGATCG CGAGCTTTAT TTATGCTTAT GCACAAACTC ATATCCAAGC TGACAGCGAA
GTTAATGATA TAGCACAGGT AACTGACAAC CTAGAGACGC TTGAACAAGG GATGCTTAAT
ACCTATGTGC GCCAGCAATG GGATGAGCCA GCGATTACTC AACAGCAATT GCAACTGCTT
ACTGAGCGTA CCACCGCATT AATGGTTCAA CGCAAACTGG CAGATAGTGA AAACTTAAAA
TCGCTGCCAT CACGCTTATC TAGACTCGGT TCACGTATTC AACTCGACCA AAAAGAGTAT
CAGTTACTCA GTGCTCTGCT AGCAAAACTT TTAAAAGACT AA
|
|---|
| Protein sequence | MSNNAPSSLA TAVSNVSNYL SCVQVVMVNT TLPANIGSAA RAMHTMGLSR LTVVDPKLPI
DDTSVSHAAG GSDLLSSAII APTLESAIAD CQLVFAASSR SRHLPRPVVT PTQAAKIMLD
FIDKQSTVNG QDGINTAPNI AILFGREDRG LTNEELAYAD YHVQIDANPA YPVLNVASAV
QVIASFIYAY AQTHIQADSE VNDIAQVTDN LETLEQGMLN TYVRQQWDEP AITQQQLQLL
TERTTALMVQ RKLADSENLK SLPSRLSRLG SRIQLDQKEY QLLSALLAKL LKD
|
|---|
| |