Gene Pcryo_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1179 
Symbol 
ID4035385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1427067 
End bp1428188 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content39% 
IMG OID637973644 
Productglycosyl transferase, group 1 
Protein accessionYP_580444 
Protein GI93006007 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.383911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00245828 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAACTA GCAATAAACC AACTATTTTA CTAATATTAA AAGCGTTAGA AGGGCGCGGT 
GCAGAACGTA TGGTCACGAC ATTGGCGCGT GCCTATATAG ATATGGATTA TGATGTCCAT
GTGCTTTCCC TAGAAGATAC GACAGATATG TGCTTAGATT CTCGCGTGCA TTACCACATC
GTTCCTTATA ATCAGCCGCT TTTTAATATA GAAACTGAGC AAGCCACCGC TTATAAAGAG
GTTGCAGCGC GCATTGATGA ATATGTACTA AAAAATATCG GAACACCTAA ATTAATCTTG
GCCAATATTT ACAAGGTTAA TTGGATTATG GCATATAGTA AGCTACCAAA TATAGTAAAC
GTATTGCACA CCGCAGTGTC CAAACAATTT CAAGAGAAGC TAGCAATCAT ACCTGCTCAA
ACCATAAGTC ATTTAAAAGT GGTTTACGGT GCTCATCCGT GCAGTTGTGT CAGTGAAGGC
GCATGCCAAG ATTTATTGAC ATTAATAGGT AACTTAAATA GAACCACGAC AATTTATAAC
CCATGCGATG TCAGTCAAAT TCAGCAATTG GCCAGTGAAC ATTTTCATAT TGAGGAGTTT
GGCTTGACTG ATAAAGGTTA TATTATTCAT GTCGCTTCGT TTGACGCTAT GAAGGGTCAT
CGTGATTTAC TGCAGGCCTA TGCCAAAACA GAGCGCAGAC TACCATTGGT TTTGGTAGGT
AAAGGTCGAC TTGAAGATAA AATAAAACAA TTAGCGATTG AGTTAAAAAT TGAGAATAAA
GTATATTTTT TAGACTTTTA TACCAATCCT TATCCGTTGA TTGCGGGAGC CGCACTGCTC
GTCATGACCT CTAAGTATGA GGGCTTTGGT TATGTTATCG TCGAAGCGCA AGCCTTAAAT
GTACCTGTTA TCAGTACGGA TTGCCCCTTT GGTCCAAGAG AGCTGTTAAC ACAGAAAAAC
CTAGTTGCTA TTGATGATAT CGAAGGGTTG GCAACGCTAA TAAGTCAGGC ATTAGATGAT
GCGAATCAAT TTATAACGCC GTTAAATCAG CAGCTATTAC CAAAACACAT TGCACAGCAG
TATTTAGATT TTTCGCTATC AATAGTAAAT GATATTAACT AA
 
Protein sequence
MITSNKPTIL LILKALEGRG AERMVTTLAR AYIDMDYDVH VLSLEDTTDM CLDSRVHYHI 
VPYNQPLFNI ETEQATAYKE VAARIDEYVL KNIGTPKLIL ANIYKVNWIM AYSKLPNIVN
VLHTAVSKQF QEKLAIIPAQ TISHLKVVYG AHPCSCVSEG ACQDLLTLIG NLNRTTTIYN
PCDVSQIQQL ASEHFHIEEF GLTDKGYIIH VASFDAMKGH RDLLQAYAKT ERRLPLVLVG
KGRLEDKIKQ LAIELKIENK VYFLDFYTNP YPLIAGAALL VMTSKYEGFG YVIVEAQALN
VPVISTDCPF GPRELLTQKN LVAIDDIEGL ATLISQALDD ANQFITPLNQ QLLPKHIAQQ
YLDFSLSIVN DIN