Gene Pcryo_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1101 
Symbol 
ID4033683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1325446 
End bp1326480 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content44% 
IMG OID637973566 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_580366 
Protein GI93005929 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.423507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTATG CCTTACTTCG CCCTTTTTTG TTTAATATGG ACCCTGAACA CGCGCATGAA 
ATGACCTTAT CCTTATTGGA TAAAGCTCAT AAAGCGCGTG TTTTAGGTTT GGTTTATGGT
CAATCTATGC AGCCAACTGA TTGCATGGGC TTGCAGTTCT CTAATCCTGT TGGTCTCGCT
GCTGGGCTAG ATAAAAACGG CGATTATATT GACGCCTTAG CTGAACTTGG TTTTGGCTTT
ATCGAAGTAG GTACGGTCAC CCCAAAGCCG CAAGCCGGTA ATGATAGACC ACGTTTATTT
AGGCTCAAAC AAGCAGACGC CATTATTAAC CGTATGGGTT TTAACAATGA AGGTGTCGAC
TACCTCATTG AAAATGTGCA GCGCTGTAAA TACAAAGGCA ATATCGGCAT TAATATCGGT
AAAAACGCTG CAACGCCAGT TGAAAAAGCG GCTGATGACT ATGTTTACTG CTTAGAGCGT
GTTTACCCAC ATGCTTCCTA CATCACTGTC AATATCTCTT CGCCAAATAC CGCAAATTTA
CGTGACCTGC AAAGCGGAGA AGCATTAACC CATCTGTTAG ATGCGATCAA AAACCGCCAC
AGTCAATTGG CAACAGAATA CGGTTTTTAT GTGCCATTGG TTCTTAAAGT CGCGCCTGAT
TTAGATCCAA TACAGGTAGA TTATATCTCT CAGCAACTGC TGGATTTCGA GATTGATGGT
TTGATTGCGA CCAATACCAC ATTGAGCCGC GTAGGCGTCG AAGATTTGCC CGATGGCGAT
CAAGCAGGCG GTTTATCAGG TCGTCCGGTC AGCCACATTA GTACGCAGAT TTTACAACAA
TTCTCTGATC AGCTGGATGG TAAAGTGGCA TTGATTGGGG TCGGCGGTAT CGATAGCGGC
GCTAAAGCTG TCAAGAAAAT CGAAGCGGGC GCAGATATGG TTCAGCTTTA TTCAGGGCTT
ATTTATAAAG GGCCTGGGCT TGTACAGTCT TGTATACAGT CTATCGGTGG TTATTACGAC
GCAATGGAAA ATTAA
 
Protein sequence
MSYALLRPFL FNMDPEHAHE MTLSLLDKAH KARVLGLVYG QSMQPTDCMG LQFSNPVGLA 
AGLDKNGDYI DALAELGFGF IEVGTVTPKP QAGNDRPRLF RLKQADAIIN RMGFNNEGVD
YLIENVQRCK YKGNIGINIG KNAATPVEKA ADDYVYCLER VYPHASYITV NISSPNTANL
RDLQSGEALT HLLDAIKNRH SQLATEYGFY VPLVLKVAPD LDPIQVDYIS QQLLDFEIDG
LIATNTTLSR VGVEDLPDGD QAGGLSGRPV SHISTQILQQ FSDQLDGKVA LIGVGGIDSG
AKAVKKIEAG ADMVQLYSGL IYKGPGLVQS CIQSIGGYYD AMEN