Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0956 |
Symbol | |
ID | 4035948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1142085 |
End bp | 1145312 |
Gene Length | 3228 bp |
Protein Length | 1075 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637973419 |
Product | SNF2-related |
Protein accession | YP_580221 |
Protein GI | 93005784 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0419207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000716871 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAATTAG CATTCTGGAA AAGAAATAAA TCGGTTGAGC ATGCTTCTGC AGAAAATTCA GTAGAAAGTA TTGCTCTTTT ACCGCTGCAA TATGATGACA TGGGTTTAAA GCACGGCTAT ACAGCTGTGG CTAAAACTGA TGCGGATTTC TATTGGGAAA GCTTAACTGA TGAAGAGGTT GCCTATCAGC TAGATGATAG CTATATATTG CCATGGGAAG AGTTGTTCCA GATTAAACAA GATCCTGATC ATAGCGATGT CATTAATTTG CTCAACTTGC CGTTATCAAA TGATTTATAT CCGATAATTC GTAGTGAAAA TGGGCTAAGT GATTCGAATT TCCAAATTAT TCTGGATGGT TGGTGTGATA AAAATAAGGT CAAGTTTAAA GGCTCAGTCA AACGAACAGG CGCAATTATT AGTATTACCG GTAAAGAATG TTTATTGAAT GAAAGCACTT GGAAGCTATT AGAGAAAATT AAAGAATTCT CCCGTGTTAC AGATAAAAAT AAATCATTAA ATCAAAAATA TTGGGCGCAA ATACGCAGTT TGGCGAATAA AAGCGAGGCG AACTTAGATG AGTTCTTGCG TAAAACGATC GTACTTGCCC CAGAAGAGCT GCAACTTAAC CTTCGTAAAA ACTTAGTTAG TACAGAGTCA GTGGTAGAGG TGCAGCCTGA TTTTAAAGAC TCACCCTCAA ATTGGCTACA AACTTTTGAT AAATATAATC AAGTACAAGA TGAATATACA ATCAGCTTAC CAGAAGGTGG TCTGGCTCAC GTTATTATCG AGCCGCAAGT TAAGAGTGTA CTCAATGAAA TTAAAAAGAT GCCAAATCGT CGGATAGCTG GCGAGCGTGC ACAGACCTTT TTACACAATC CTTTTGCTCA GTTAGGGGAG GATGCCATAG AGGTTATATC TCCAGAGGGC TTTGAGCAAT CCAAAGAAGA GGCAGAGATC TATAGCTATC GTTTGCTCAT AGATAAAAAT TATGATGAAT TATCACATTT TAGTTCCGCT CAATTAACGT TGCATGAAAT TTCAAGTAGA GCACAAGACC CTATTCTGTT AGAACTTTCA AATCTAGAGC AAGCTCAACA CTTTATTGCT ACTTATGAGC GATCATCACC TGTGTTCCTA TGGGCAGGTT ATAGTATAGA TAGAAGCAAC TACTTAGATA ATCAAGTAGA CGAGCTGAAA AGCGATCTAG AAAAAATTCA ACAGTATGAT GATGAATTGC AAGCTAGAAC AGTGCTAGAT TTAAGCAATT ACAGCGATAG AGTGATAGGG ATTGGTGAAG CTGAAAAACT GAGCTCTGAC GCCATTCAAA AAGATAGTGG TGAATCCGAA TGGTTACCAC AGAATCTTAT AGATGGGTCA GCTGACTTAT CTCAATTTAC TTCTGATAAT ACTGATGCCA CTACTGAACT ACTTGAGCAA CGTATCCAGC ATGCAGAGGA AGAAGGCGAG AGCTTTGTTC TACATCCGGA CAGCAACGTC TCCATTCCAT TAGATGATGC AAAAAAACTA CTTGATGATC TGCGTGATTC AAAGACTGGG GATCCAGTTG AAAACGACAT AGAGCAAGAG CAGCCAAAAG CTGATGAAAC AAAGAAAAAA TCTACCTTAT TGATTGCCAA TAATATCGAT GAGGCTGACT TTACTAAGAA GCGAGCCGAG ACTCTGACTT TTGATGAAAG CAACCGCCCT CAGGCCAGAT TGCCATCAAG TTTTAGAAGC CAAGAATTTA GTCTAAAAAC GCATCAAGAA TATGGTATCG CTTGGCTACA GAACCTATAT CAGTATGCAC CAAATCAGGT AAGCGGCTGC TTGTTAGCAG ATGATATGGG TTTAGGGAAA ACTTTGCAGT TACTTTGCTT CATTGGTGAA TATCTAGAAA CCGCAGAAGA TAAAAAACCT GCATTAGTCG TAGCGCCAGT TTCTTTATTG GAGAACTGGG AGGCTGAAAT CAATAGGTTT TTTAGTGCAA AGTTCGGAAA AGTGTTAAGT TTATATGGCG ATAACTTAAA ACAGCGAAAA ATACCCAAGC ACCTAATATC TTCTCAATTA AGAAATGATT ATGGGATAAC AAATCTACTT GAAGATAATT GGTTAGGTGG TGCAGATATC GTACTGACTA CTTATGAGAC CATGCGAGAC CTTGAGTTTT CTTTAGGGAG GGTAGATTGG AGTATCATGA TATGTGATGA AGCCCAAAAA ATAAAAGTGC CCACTGCAAT GGTTACTAAA GCTGCTAAAG CCCAAAAAGC AGACTTTAAG ATCGCTTGTA CAGGCACGCC TGTAGAGAAT TCACTTGTTG ATCTATGGTG CTTATTTGAT TTCATTCAAG AAAATCTGAT GGGTTCACTT AGTGAATTTA ATAAAGAGTA TCGACGTCCT ATTGAAAAGA AAGACGATGA AGACAACGCG ATAATAGATG AGCTTCGTCA ATTGATTGAG CCACAAGTAT TAAGACGTAT GAAGCATGAT GTCGCTGAGT TGCCAGCAAA ACACGAAATT AATGATTGTA AAAATATTGA AATATCAACG CTGCAACGCA CACTTTATAA ACAAGTATCA AATGATTATA GAAGTTTATC TGAGCAAGGC CACAAAGGCG TTATGTTAAA AGCACTACAT GACATGCGAA TGATTTGTGC TCACCCCCTG AATTTTCAAG AACAAGCGAC TATCAATGAT TCGCCTAAAG CCGAATGGTT AATAAACACT TTAGAGACCA TAAAACAAAA AAATGAGAAG GTTATCATTT TTACTGAGTT CAGGGCTATT CAAGTGTTTT TAAAGCGGCT TCTCCTTGAG CGGTTTGGAT TAAACGTTAC TACAGTGAAT GGGGATTCAA ATACTAATAG TAGAGTAGGC TTAACGCGGC AGGGCATTAT TGATAAGTTC CAAGAAACGA ATGGTTTCAA TGTGATTATC TTATCCACTG TGGCAGTTGG CTTTGGTGTG AATATCCAAA AAGCAAACCA TGTTATCCAC TATACACGCA GTTGGAACCC AGCTAAGGAA GACCAAGCGA CTGATAGAGC CTACCGTATT GGTCAAGATA AAGAGGTTTA CGTGTATTAT CCGTCTATCG CAGCAGATGA TTTTGAGACG TTTGAAATCA AACTGGATAA GCTATTATCT AGTAAGCGCA GTCTTGCTGA TGATATGTTG AAACCAAACG TAGAGCTTAC TCAAGAATTG ATTCAGTCGA TCTATTGA
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Protein sequence | MKLAFWKRNK SVEHASAENS VESIALLPLQ YDDMGLKHGY TAVAKTDADF YWESLTDEEV AYQLDDSYIL PWEELFQIKQ DPDHSDVINL LNLPLSNDLY PIIRSENGLS DSNFQIILDG WCDKNKVKFK GSVKRTGAII SITGKECLLN ESTWKLLEKI KEFSRVTDKN KSLNQKYWAQ IRSLANKSEA NLDEFLRKTI VLAPEELQLN LRKNLVSTES VVEVQPDFKD SPSNWLQTFD KYNQVQDEYT ISLPEGGLAH VIIEPQVKSV LNEIKKMPNR RIAGERAQTF LHNPFAQLGE DAIEVISPEG FEQSKEEAEI YSYRLLIDKN YDELSHFSSA QLTLHEISSR AQDPILLELS NLEQAQHFIA TYERSSPVFL WAGYSIDRSN YLDNQVDELK SDLEKIQQYD DELQARTVLD LSNYSDRVIG IGEAEKLSSD AIQKDSGESE WLPQNLIDGS ADLSQFTSDN TDATTELLEQ RIQHAEEEGE SFVLHPDSNV SIPLDDAKKL LDDLRDSKTG DPVENDIEQE QPKADETKKK STLLIANNID EADFTKKRAE TLTFDESNRP QARLPSSFRS QEFSLKTHQE YGIAWLQNLY QYAPNQVSGC LLADDMGLGK TLQLLCFIGE YLETAEDKKP ALVVAPVSLL ENWEAEINRF FSAKFGKVLS LYGDNLKQRK IPKHLISSQL RNDYGITNLL EDNWLGGADI VLTTYETMRD LEFSLGRVDW SIMICDEAQK IKVPTAMVTK AAKAQKADFK IACTGTPVEN SLVDLWCLFD FIQENLMGSL SEFNKEYRRP IEKKDDEDNA IIDELRQLIE PQVLRRMKHD VAELPAKHEI NDCKNIEIST LQRTLYKQVS NDYRSLSEQG HKGVMLKALH DMRMICAHPL NFQEQATIND SPKAEWLINT LETIKQKNEK VIIFTEFRAI QVFLKRLLLE RFGLNVTTVN GDSNTNSRVG LTRQGIIDKF QETNGFNVII LSTVAVGFGV NIQKANHVIH YTRSWNPAKE DQATDRAYRI GQDKEVYVYY PSIAADDFET FEIKLDKLLS SKRSLADDML KPNVELTQEL IQSIY
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