| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0930 |
|---|
| Symbol | |
|---|
| ID | 4033991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1102212 |
|---|
| End bp | 1102991 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973393 |
|---|
| Product | transposase, mutator type |
|---|
| Protein accession | YP_580195 |
|---|
| Protein GI | 93005758 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.385661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00180839 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGACA TCACTGCGTG GCAGAATAGA CCACTGAGCA GTGTTTATCC TATCGTCTAT
TTGGACTGTA TTGTTGTTAA AGTACGTCAA GATAAGCAGA TCATCAACAA GGCTATCTAT
CTGGCGCTAG GGGTGGGACT TAACGGTAAA AAAGAGCTGC TGGGTATGTG GTTATCAGAG
AATGAGGGCG CTAAGTTCTG GCTAGGCGTT CTCACTGAAT TGCAAAACCG CGGGGTACAA
GACATACTCA TTGCCTGTGT CGACGGTTTA AAGGGCTTTC CTGATGCCAT CAATACTGTT
TACCCCAACG CTCAGGTTCA GCTGTGTATC GTGCACATGG TGCGTTATTC AATGAAGTTC
GTACCATGGA CGGACAAAAA GGCCGTAGCG GCTGATTTAA AGGCAATTTA TGGTGCTGAT
ACTATAGAGA TAGCAGAGGC CAATCTTGAG CACTTTGATG AGACTTGGGG TAAAGAGTAC
CCGCACGTGG TTAAGTCTTG GCGCAATAAC TGGGAAGGCT TAACGGTGTT CTTTGGTTAC
CCTAAAGACA TCAGAAAAGT CATATATACC ACCAATGCTA TTGAGTCGCT AAACAGTGTG
ATTCGTACGG CAGTGAATAA GCGTAAGGTG TTCCCGTCTG ATCAGGCAGC GTTTAAGGTA
GTCTATCTAG CAACCCAGCA GGCGTCTAAA AAGTGGTCGA TGCCGATTCG TAACTGGACG
TCTGCCCTTA ATCGCTTTAT GATTATGTTT GATGATCGTA TCAGTAAGCA TTTAATCTAA
|
|---|
| Protein sequence | MEDITAWQNR PLSSVYPIVY LDCIVVKVRQ DKQIINKAIY LALGVGLNGK KELLGMWLSE
NEGAKFWLGV LTELQNRGVQ DILIACVDGL KGFPDAINTV YPNAQVQLCI VHMVRYSMKF
VPWTDKKAVA ADLKAIYGAD TIEIAEANLE HFDETWGKEY PHVVKSWRNN WEGLTVFFGY
PKDIRKVIYT TNAIESLNSV IRTAVNKRKV FPSDQAAFKV VYLATQQASK KWSMPIRNWT
SALNRFMIMF DDRISKHLI
|
|---|
| |