Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0869 |
Symbol | |
ID | 4035305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1028911 |
End bp | 1029588 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637973332 |
Product | anti-sigm factor, ChrR |
Protein accession | YP_580134 |
Protein GI | 93005697 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3806] Anti-sigma factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0948086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATCA ATGCAGACTT TTCATGCCGT GCTGCCTTAG CACCTGAACA CTATCAGTGG GTCCAATCAC CACAAAACGG CGTCGAGCGC GTGATGCTTG ACCGAGTTGG CACCGAAAAA GCGCGTGCTA CCAGTATCGT ACGCTATGCC CCTGAGTCAA ATTTTCCGCA TCATCTGCAC CCAGGAGGTG AAGAGATTCT GGTATTGTCA GGCACTTTTT CTGCGGATAA CAACGATTAT CCTACTGGTT GGTATCTACG CAATCCACCG ACTTCAGGGC ATCAGCCTTA TAGTCATGAG GGGGCTGTTA TTTTTGTCAA ACTTTGGCAG ATGACAGTCG ACGAGACCCG TCATGTCGCT ATCGATACCA ACGATGCTGA CAACTGGCAA GAACAAGGCG GCCGTGAGGT TTGCCAGTTA TACTCGAATG CAAAGGAGCA AGTGAGCTTG CAACGTATCA ATGCAGGTGA GGCATTGTTT ACAGGTATCA TTGTAGGAGG TGCTGAGCTA TTGGTACTAG AGGGCACGTT GATAGAAGCG GGACAGAGTT ATCAGCGCGG TAGTTGGATA CGTCTGCCTA TCGATGCGAT ATCGCAAATA ACAGCAGGAG AGAATGCCGC CACGGTTTAT CTAAAAACTG GACATTTATC ACAAATCATC GGTATCGATG TTCACTGA
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Protein sequence | MLINADFSCR AALAPEHYQW VQSPQNGVER VMLDRVGTEK ARATSIVRYA PESNFPHHLH PGGEEILVLS GTFSADNNDY PTGWYLRNPP TSGHQPYSHE GAVIFVKLWQ MTVDETRHVA IDTNDADNWQ EQGGREVCQL YSNAKEQVSL QRINAGEALF TGIIVGGAEL LVLEGTLIEA GQSYQRGSWI RLPIDAISQI TAGENAATVY LKTGHLSQII GIDVH
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