Gene Pcryo_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0869 
Symbol 
ID4035305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1028911 
End bp1029588 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content49% 
IMG OID637973332 
Productanti-sigm factor, ChrR 
Protein accessionYP_580134 
Protein GI93005697 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0948086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCA ATGCAGACTT TTCATGCCGT GCTGCCTTAG CACCTGAACA CTATCAGTGG 
GTCCAATCAC CACAAAACGG CGTCGAGCGC GTGATGCTTG ACCGAGTTGG CACCGAAAAA
GCGCGTGCTA CCAGTATCGT ACGCTATGCC CCTGAGTCAA ATTTTCCGCA TCATCTGCAC
CCAGGAGGTG AAGAGATTCT GGTATTGTCA GGCACTTTTT CTGCGGATAA CAACGATTAT
CCTACTGGTT GGTATCTACG CAATCCACCG ACTTCAGGGC ATCAGCCTTA TAGTCATGAG
GGGGCTGTTA TTTTTGTCAA ACTTTGGCAG ATGACAGTCG ACGAGACCCG TCATGTCGCT
ATCGATACCA ACGATGCTGA CAACTGGCAA GAACAAGGCG GCCGTGAGGT TTGCCAGTTA
TACTCGAATG CAAAGGAGCA AGTGAGCTTG CAACGTATCA ATGCAGGTGA GGCATTGTTT
ACAGGTATCA TTGTAGGAGG TGCTGAGCTA TTGGTACTAG AGGGCACGTT GATAGAAGCG
GGACAGAGTT ATCAGCGCGG TAGTTGGATA CGTCTGCCTA TCGATGCGAT ATCGCAAATA
ACAGCAGGAG AGAATGCCGC CACGGTTTAT CTAAAAACTG GACATTTATC ACAAATCATC
GGTATCGATG TTCACTGA
 
Protein sequence
MLINADFSCR AALAPEHYQW VQSPQNGVER VMLDRVGTEK ARATSIVRYA PESNFPHHLH 
PGGEEILVLS GTFSADNNDY PTGWYLRNPP TSGHQPYSHE GAVIFVKLWQ MTVDETRHVA
IDTNDADNWQ EQGGREVCQL YSNAKEQVSL QRINAGEALF TGIIVGGAEL LVLEGTLIEA
GQSYQRGSWI RLPIDAISQI TAGENAATVY LKTGHLSQII GIDVH